RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 FAM122BQ7Z309 247 aa11.71□□□□□ -0.53
SNX1-211ENST00000560829 IGFN1Q86VF2 1251 aa11.71□□□□□ -0.53
SNX1-211ENST00000560829 DND1Q8IYX4 353 aaKnown RBP11.71□□□□□ -0.53
SNX1-211ENST00000560829 SIRT6Q8N6T7 355 aa11.71□□□□□ -0.53
SNX1-211ENST00000560829 C10orf53Q8N6V4 93 aa11.71□□□□□ -0.53
SNX1-211ENST00000560829 NDEL1Q9GZM8 345 aa11.71□□□□□ -0.53
SNX1-211ENST00000560829 KLRF1Q9NZS2 232 aa11.71□□□□□ -0.53
SNX1-211ENST00000560829 FARSAQ9Y285 508 aaKnown RBP11.71□□□□□ -0.53
SNX1-211ENST00000560829 ADAM18Q9Y3Q7 739 aa11.71□□□□□ -0.53
SNX1-211ENST00000560829 WIF1Q9Y5W5 379 aa11.71□□□□□ -0.53
SNX1-211ENST00000560829 TMEM72A0PK05 275 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 TP53I11O14683 189 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 TGM1P22735 817 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 SOX3P41225 446 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 APOBEC1P41238 236 aaKnown RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 MAP2K6P52564 334 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNX1-211ENST00000560829 ALG10Q5BKT4 473 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 FAM69AQ5T7M9 428 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 DHRS13Q6UX07 377 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 NANOGNBQ7Z5D8 188 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 ESX1Q8N693 406 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 NPEPL1Q8NDH3 523 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 OR52E2Q8NGJ4 325 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 OR51G2Q8NGK0 314 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 OR52N1Q8NH53 320 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 NDNFQ8TB73 568 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 DYNC2LI1Q8TCX1 351 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 OTULINQ96BN8 352 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 NTNG2Q96CW9 530 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 FRMD6Q96NE9 622 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 KATNB1Q9BVA0 655 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 NMNAT2Q9BZQ4 307 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 B3GNT4Q9C0J1 378 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 METTL7AQ9H8H3 244 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 ZNF160Q9HCG1 818 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 INPP5EQ9NRR6 644 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 NDUFB11Q9NX14 153 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 ERVK13-1Q9NX77 482 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 CHCHD2Q9Y6H1 151 aaPredicted RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 ZC3H12DA2A288 527 aaKnown RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 BLOC1S5-TXNDC5H3BN57 136 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 ICAM2P13598 275 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 CPEP16870 476 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 ATP6V1E1P36543 226 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 RPS5P46782 204 aaKnown RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 CLK1P49759 484 aaKnown RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 LSM3P62310 102 aaKnown RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 TUBA1BP68363 451 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 ACSM1Q08AH1 577 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 POU4F2Q12837 409 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 DYNC1I2Q13409 638 aaKnown RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 TPBGQ13641 420 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 TRIP6Q15654 476 aaKnown RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 GXYLT1Q4G148 440 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 KLHL12Q53G59 568 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 EMC4Q5J8M3 183 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 HES3Q5TGS1 186 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 C1orf140Q5VVS0 124 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 BICRALQ6AI39 1079 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 GDPGP1Q6ZNW5 385 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 LINC00299Q6ZSB3 139 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 TUBA1AQ71U36 451 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 ACBD7Q8N6N7 88 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 CYB561A3Q8NBI2 242 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 FAM98AQ8NCA5 519 aaKnown RBP11.7□□□□□ -0.54
SNX1-211ENST00000560829 SDR9C7Q8NEX9 313 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 OR4K13Q8NH42 304 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 TBC1D15Q8TC07 691 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 TM9SF4Q92544 642 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 ARHGAP9Q9BRR9 750 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 OR51E2Q9H255 320 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 MED11Q9P086 117 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 FOXJ2Q9P0K8 574 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 PPP4R1LQ9P1A2 415 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 HRH3Q9Y5N1 445 aa11.7□□□□□ -0.54
SNX1-211ENST00000560829 C2orf72A6NCS6 295 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 TERTO14746 1132 aaKnown RBP11.69□□□□□ -0.54
SNX1-211ENST00000560829 OR2T1O43869 369 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 CLPXO76031 633 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 HPP00738 406 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 HIST1H2ABP04908 130 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 SDHAP31040 664 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 MLF1P58340 268 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 RPS18P62269 152 aaKnown RBP11.69□□□□□ -0.54
SNX1-211ENST00000560829 RPS15P62841 145 aaKnown RBP11.69□□□□□ -0.54
SNX1-211ENST00000560829 ERVK-25P63136 954 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 RPL18Q07020 188 aaKnown RBP11.69□□□□□ -0.54
SNX1-211ENST00000560829 TCF15Q12870 199 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 CHAF1BQ13112 559 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 IL10RAQ13651 578 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 GGTLC2Q14390 218 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 SGCBQ16585 318 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 OR2G6Q5TZ20 316 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 OR5M10Q6IEU7 315 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 HIST3H2AQ7L7L0 130 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 MAMDC2Q7Z304 686 aaPredicted RBP11.69□□□□□ -0.54
SNX1-211ENST00000560829 PHC2Q8IXK0 858 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 HIST1H2ACQ93077 130 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 ZHX1-C8orf76Q96EF9 292 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms