RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 GPAT4Q86UL3 456 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 DDIASQ8IXT1 998 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 C4orf33Q8N1A6 199 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 ARFGAP2Q8N6H7 521 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 OR51F2Q8NH61 342 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 CKAP2Q8WWK9 683 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 FAHD2AQ96GK7 314 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 ZNF317Q96PQ6 595 aaPredicted RBP15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 TUBB1Q9H4B7 451 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 NARFLQ9H6Q4 476 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 ZNF696Q9H7X3 374 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 KCNE5Q9UJ90 142 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 TMED7Q9Y3B3 224 aa15.43■□□□□ 0.06
TSPAN3-208ENST00000560514 CENPVL1A0A0U1RR11 272 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 LYNX1G3V0Z9 82 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 TFP02787 698 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 ADRA2AP08913 450 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 LYNX1P0DP58 116 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 CALCRP30988 508 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 IDH2P48735 452 aaKnown RBP15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 TUBA1BP68363 451 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 TUBA4AP68366 448 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 ARHGAP11BQ3KRB8 267 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 ATAD3BQ5T9A4 648 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 TUBA1AQ71U36 451 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 OR9K2Q8NGE7 335 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 OIT3Q8WWZ8 545 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 APOPT1Q96IL0 206 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 SLC35G5Q96KT7 338 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 PPP3R2Q96LZ3 170 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 SF3B5Q9BWJ5 86 aaKnown RBP15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 SUCNR1Q9BXA5 334 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 ZNF350Q9GZX5 532 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 TPK1Q9H3S4 243 aa15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 CRNNQ9UBG3 495 aaPredicted RBP15.42■□□□□ 0.06
TSPAN3-208ENST00000560514 A0A096LPE4 126 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 ARPC4-TTLL3A0A0A6YYG9 625 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 A0A1W2PPZ6 126 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 TLDC2A0PJX2 215 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 OR6C65A6NJZ3 312 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 ZNF208O43345 1280 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 LYPLA1O75608 230 aaPredicted RBP15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 SAGP10523 405 aaPredicted RBP15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 IMPDH2P12268 514 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 ALDH3A1P30838 453 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 POLR2HP52434 150 aaKnown RBP15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 TMEM225Q6GV28 225 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 EMBQ6PCB8 327 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 SHISA2Q6UWI4 295 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 FAM71CQ8NEG0 241 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 CLDND2Q8NHS1 167 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 ZNF385AQ96PM9 386 aaKnown RBP15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 LGALS13Q9UHV8 139 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 WDR45Q9Y484 360 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 PCDHGB1Q9Y5G3 927 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 TGP01266 2768 aa15.41■□□□□ 0.06
TSPAN3-208ENST00000560514 NR5A2O00482 541 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 TMPRSS2O15393 492 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 AGR2O95994 175 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 IGLV1-44P01699 117 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 GPIP06744 558 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 MAP2K6P52564 334 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 HGFACQ04756 655 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 MAPK14Q16539 360 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 OLIG3Q7RTU3 272 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 C6orf120Q7Z4R8 191 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 CDK20Q8IZL9 346 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 FAM169BQ8N8A8 192 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 MAGEE2Q8TD90 523 aaPredicted RBP15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 TWIST2Q8WVJ9 160 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 ALKBH3Q96Q83 286 aaPredicted RBP15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 PIF1Q9H611 641 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 EXOSC3Q9NQT5 275 aaKnown RBP15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 CMAHPQ9Y471 501 aa15.4■□□□□ 0.06
TSPAN3-208ENST00000560514 TRAV20A0A0B4J274 112 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 TMEM72A0PK05 275 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 SCN2BO60939 215 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 AKR7A3O95154 331 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 BCL10O95999 233 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 PNPP00491 289 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 HOXB1P14653 301 aaPredicted RBP15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 ARFIP2P53365 341 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 HBA1P69905 142 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 KCNJ10P78508 379 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 HPCAP84074 193 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 PTGR1Q14914 329 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 OR7A5Q15622 319 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 SLC9B1Q4ZJI4 515 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 ZNF311Q5JNZ3 666 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 REP15Q6BDI9 236 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 BPIFB2Q8N4F0 458 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 TMEM99Q8N816 258 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 BCL2L2Q92843 193 aaPredicted RBP15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 DUSP26Q9BV47 211 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 ZNF747Q9BV97 191 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 MS4A5Q9H3V2 200 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 SERHL2Q9H4I8 314 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 TREM2Q9NZC2 230 aa15.39■□□□□ 0.05
TSPAN3-208ENST00000560514 OSGIN1Q9UJX0 560 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms