RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 C1orf229Q6ZS94 237 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 TUBA1AQ71U36 451 aa17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 PSMC3IPQ9P2W1 217 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 SH3PXD2BA1X283 911 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 TRIM77I1YAP6 450 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 AP3D1O14617 1153 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 PIP5K1BO14986 540 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 CFLARO15519 480 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 RIPK2O43353 540 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 MAPK1P28482 360 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 CRHR1P34998 444 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 P2RY4P51582 365 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 POLR2HP52434 150 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 MAP2K6P52564 334 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 UBE2NP61088 152 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 KCNJ10P78508 379 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 FUT5Q11128 374 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 SCGB2A2Q13296 93 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 XKR7Q5GH72 579 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 FRRS1Q6ZNA5 592 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 C16orf62Q7Z3J2 963 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 SPATA21Q7Z572 469 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 CARM1Q86X55 608 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 DDIASQ8IXT1 998 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 CDK20Q8IZL9 346 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 ARFGAP2Q8N6H7 521 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 CLDND2Q8NHS1 167 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 TWIST2Q8WVJ9 160 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 PPP3R2Q96LZ3 170 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 ANKRD27Q96NW4 1050 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 PRPF18Q99633 342 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 DUSP26Q9BV47 211 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 RBM4Q9BWF3 364 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 GATA5Q9BWX5 397 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 OR51I1Q9H343 314 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 ZNF696Q9H7X3 374 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 POLE3Q9NRF9 147 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 TBK1Q9UHD2 729 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 WDR45Q9Y484 360 aa17.06■□□□□ 0.32
RABGGTA-214ENST00000560163 LIPT2A6NK58 231 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 AQP7P3A6NL99 342 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 PEX11AO75192 247 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 AKR7A3O95154 331 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 MSMBP08118 114 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 CELA3BP08861 270 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 ADRA2AP08913 450 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 HOXB1P14653 301 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 PRPS1L1P21108 318 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 TACR3P29371 465 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 SELENOPP49908 381 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 AWAT1Q58HT5 328 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 ELFN2Q5R3F8 820 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 C6orf136Q5SQH8 315 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 C10orf107Q8IVU9 208 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 NOA1Q8NC60 698 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 CKAP2Q8WWK9 683 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 CNOT9Q92600 299 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 MOV10Q9HCE1 1003 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 EXD2Q9NVH0 621 aa17.05■□□□□ 0.32
RABGGTA-214ENST00000560163 VWFP04275 2813 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 A0A096LPE4 126 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 IGHV2OR16-5A0A0B4J2B6 119 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 A0A1W2PPZ6 126 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 PRAMEF27A3QJZ7 478 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 VSTM5A8MXK1 200 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 TMEM229AB2RXF0 380 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 ZNF587BE7ETH6 402 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 WNT9BO14905 357 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 TMPRSS2O15393 492 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 OR12D1P0DN82 309 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 CBR1P16152 277 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 SOAT1P35610 550 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 CCT5P48643 541 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 IL1RL1Q01638 556 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 CEACAM7Q14002 265 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 CREB3L2Q70SY1 520 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 TRMT10CQ7L0Y3 403 aaKnown RBP17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 HMGN2P46Q86SG4 172 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 HOMEZQ8IX15 550 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 CLECL1Q8IZS7 167 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 CNPY4Q8N129 248 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 XAGE5Q8WWM1 108 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 SLC35G5Q96KT7 338 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 C3orf30Q96M34 536 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 LRRC37BQ96QE4 947 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 C1orf50Q9BV19 199 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 USP22Q9UPT9 525 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 GRIP1Q9Y3R0 1128 aa17.04■□□□□ 0.32
RABGGTA-214ENST00000560163 FAAHO00519 579 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 SKAP2O75563 359 aaPredicted RBP17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 UPK3AO75631 287 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 KRT33AO76009 404 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 AVPP01185 164 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 GPIP06744 558 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 CHRNGP07510 517 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 COL8A2P25067 703 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 LIMS1P48059 325 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 FAM153CQ494X1 144 aa17.03■□□□□ 0.32
RABGGTA-214ENST00000560163 IL23RQ5VWK5 629 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms