RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 OGFRL1Q5TC84 451 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 TIGD3Q6B0B8 471 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZNF770Q6IQ21 691 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 PGBD2Q6P3X8 592 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 AAGABQ6PD74 315 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZNF730Q6ZMV8 503 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 Q6ZPB1 254 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 ASB18Q6ZVZ8 466 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 TRILQ7L0X0 811 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZNF550Q7Z398 422 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 IGFN1Q86VF2 1251 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 CYP4Z1Q86W10 505 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 NRMQ8IXM6 262 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 GPALPP1Q8IXQ4 340 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 DND1Q8IYX4 353 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 GALNT4Q8N4A0 578 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZADH2Q8N4Q0 377 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 CBR4Q8N4T8 237 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 PIK3C3Q8NEB9 887 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 FAM83FQ8NEG4 500 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 OR10G2Q8NGC3 310 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 OR4K5Q8NGD3 323 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 OR14L1PQ8NHC6 308 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 HAS2Q92819 552 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 PMM1Q92871 262 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 KTI12Q96EK9 354 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 CENPNQ96H22 339 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 SGCZQ96LD1 299 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 SECISBP2Q96T21 854 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 MBOAT4Q96T53 435 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZNF559Q9BR84 538 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 DEFB127Q9H1M4 99 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 UBQLN3Q9H347 655 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ZCCHC4Q9H5U6 513 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 PRORYQ9H606 182 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 ARMC7Q9H6L4 198 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 DCLRE1BQ9H816 532 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 COQ10BQ9H8M1 238 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 REEP1Q9H902 201 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 TMEM27Q9HBJ8 222 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 MEPEQ9NQ76 525 aaPredicted RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 DNAJB9Q9UBS3 223 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 IL20RAQ9UHF4 553 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 OSGIN1Q9UJX0 560 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 FAM32AQ9Y421 112 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 FREM3P0C091 2139 aa4.7□□□□□ -1.66
SPG11-220ENST00000559933 SMG1Q96Q15 3661 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 TPRP12270 2363 aaKnown RBP4.7□□□□□ -1.66
SPG11-220ENST00000559933 MPDZO75970 2070 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TRAV27A0A087WT01 109 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TMED7-TICAM2A0A0A6YYA0 188 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 IGHV3-15A0A0B4J1V0 119 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 TRAV17A0A0B4J275 112 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 A0A1W2PRQ8 180 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SH3PXD2BA1X283 911 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 OR2M5A3KFT3 312 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 NUDT19A8MXV4 375 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZNF814B7Z6K7 855 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 DLGAP1O14490 977 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ADAMDEC1O15204 470 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SEC14L5O43304 696 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 CHP2O43745 196 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SUSD5O60279 629 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 OR10H3O60404 316 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 FMO6PO60774 539 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 RAMP1O60894 148 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 GLSO94925 669 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 CCNB2O95067 398 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SNX4O95219 450 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 CH25HO95992 272 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 GASTP01350 101 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 INHBBP09529 407 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 IFI30P13284 250 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZNF24P17028 368 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ZNF26P17031 533 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 ITGA2P17301 1181 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 BMP7P18075 431 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 PGCP20142 388 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 FPR1P21462 350 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 EPHA2P29317 976 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 SRD5A2P31213 254 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 DNAJA1P31689 397 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 POLR2IP36954 125 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 SLC1A3P43003 542 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 RPS5P46782 204 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 SLC6A8P48029 635 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 PTDSS1P48651 473 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 DAPP51397 102 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 POLR2HP52434 150 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 UCNP55089 124 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 MLLT10P55197 1068 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 DSCR4P56555 118 aaPredicted RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 CLDN20P56880 219 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 FXYD6P3P58550 94 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 COPZ1P61923 177 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 PPIAP62937 165 aaKnown RBP4.69□□□□□ -1.66
SPG11-220ENST00000559933 SRYQ05066 204 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 EGR4Q05215 589 aa4.69□□□□□ -1.66
SPG11-220ENST00000559933 ST3GAL3Q11203 375 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms