RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 A4GALTQ9NPC4 353 aa15.57■□□□□ 0.08
HDDC3-205ENST00000559898 ASB6Q9NWX5 421 aa15.57■□□□□ 0.08
HDDC3-205ENST00000559898 ADPRHL2Q9NX46 363 aa15.57■□□□□ 0.08
HDDC3-205ENST00000559898 CISD1Q9NZ45 108 aaKnown RBP15.57■□□□□ 0.08
HDDC3-205ENST00000559898 A0A1W2PP18 115 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 AQP7P3A6NL99 342 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 GPR171O14626 319 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 THBS1P07996 1170 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 ARAFP10398 606 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 ACVR1BP36896 505 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 SELPLGQ14242 412 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 KRTAP21-3Q3LHN1 58 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 AGKQ53H12 422 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 C1orf140Q5VVS0 124 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 GPAT4Q86UL3 456 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 ZNF440Q8IYI8 595 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 PIAS4Q8N2W9 510 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-205ENST00000559898 MUCL1Q96DR8 90 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 MUS81Q96NY9 551 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 NAA11Q9BSU3 229 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-205ENST00000559898 BDH2Q9BUT1 245 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 TRAF4Q9BUZ4 470 aaPredicted RBP15.56■□□□□ 0.08
HDDC3-205ENST00000559898 BCL2L10Q9HD36 194 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 TAS2R16Q9NYV7 291 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 CALML5Q9NZT1 146 aa15.56■□□□□ 0.08
HDDC3-205ENST00000559898 HEATR1Q9H583 2144 aaKnown RBP15.56■□□□□ 0.08
HDDC3-205ENST00000559898 ALPK2Q86TB3 2170 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 FTCDNL1E5RQL4 147 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 M0R1B8 84 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 GPIP06744 558 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 CDH2P19022 906 aaPredicted RBP15.55■□□□□ 0.08
HDDC3-205ENST00000559898 NCF2P19878 526 aaPredicted RBP15.55■□□□□ 0.08
HDDC3-205ENST00000559898 FKBP2P26885 142 aaKnown RBP15.55■□□□□ 0.08
HDDC3-205ENST00000559898 PCSK6P29122 969 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 SELENOPP49908 381 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 LARS2Q15031 903 aaKnown RBP15.55■□□□□ 0.08
HDDC3-205ENST00000559898 ADRM1Q16186 407 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 HIKESHIQ53FT3 197 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 EPHX4Q8IUS5 362 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 GOLGA6L1Q8N7Z2 621 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 KTI12Q96EK9 354 aaPredicted RBP15.55■□□□□ 0.08
HDDC3-205ENST00000559898 CCDC28BQ9BUN5 200 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 AMBRA1Q9C0C7 1298 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 NGBQ9NPG2 151 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 SLC9A8Q9Y2E8 581 aa15.55■□□□□ 0.08
HDDC3-205ENST00000559898 CSPG4Q6UVK1 2322 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 IGKV1D-42A0A075B6H8 117 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 A8MVM7 634 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 INAFM1C9JVW0 142 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 RNF223E7ERA6 249 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 TPST2O60704 377 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 EIF1BO60739 113 aaKnown RBP15.54■□□□□ 0.08
HDDC3-205ENST00000559898 TGDSO95455 350 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 CBLP22681 906 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 CD40P25942 277 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 RPS5P46782 204 aaKnown RBP15.54■□□□□ 0.08
HDDC3-205ENST00000559898 STX1BP61266 288 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 CLEC12BQ2HXU8 276 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 DLEU7Q6UYE1 221 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 AAED1Q7RTV5 226 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 WDFY1Q8IWB7 410 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 BBS10Q8TAM1 723 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 GTPBP3Q969Y2 492 aaKnown RBP15.54■□□□□ 0.08
HDDC3-205ENST00000559898 TMEM45BQ96B21 275 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 SLC25A36Q96CQ1 311 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 SLCO5A1Q9H2Y9 848 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 SLC17A5Q9NRA2 495 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 UPB1Q9UBR1 384 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 B3GALT5Q9Y2C3 310 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 TLN2Q9Y4G6 2542 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 ABCA2Q9BZC7 2435 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 PLCE1Q9P212 2302 aa15.54■□□□□ 0.08
HDDC3-205ENST00000559898 UPK3AO75631 287 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 SASH3O75995 380 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 UQCRBP14927 111 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 AQP1P29972 269 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 COPZ1P61923 177 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 IRX1P78414 480 aaPredicted RBP15.53■□□□□ 0.08
HDDC3-205ENST00000559898 FADDQ13158 208 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 GCNT6Q5T4J0 391 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 C11orf71Q6IPW1 123 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 CREB3L2Q70SY1 520 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 DTX2Q86UW9 622 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 RETREG3Q86VR2 466 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 P2RY8Q86VZ1 359 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 PRIMA1Q86XR5 153 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 CPPED1Q9BRF8 314 aaPredicted RBP15.53■□□□□ 0.08
HDDC3-205ENST00000559898 ZNF385DQ9H6B1 395 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 ZNF232Q9UNY5 417 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 IFT52Q9Y366 437 aa15.53■□□□□ 0.08
HDDC3-205ENST00000559898 A0A1B0GWA3 101 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 LGI1O95970 557 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 PNMTP11086 282 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 TUBA1BP68363 451 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 TUBA4AP68366 448 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 CDK6Q00534 326 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 VEZF1Q14119 521 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 TUBA1AQ71U36 451 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 DYDC1Q8WWB3 177 aa15.52■□□□□ 0.08
HDDC3-205ENST00000559898 CKAP2Q8WWK9 683 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms