RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 IL1RL1Q01638 556 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 PLAURQ03405 335 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 BNIP2Q12982 314 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 C1DQ13901 141 aaKnown RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 CEACAM7Q14002 265 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 VEZF1Q14119 521 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 SLC17A1Q14916 467 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 STK11Q15831 433 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 RABL3Q5HYI8 236 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ANKRD34AQ69YU3 496 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 REP15Q6BDI9 236 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ABLIM2Q6H8Q1 611 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ALKBH2Q6NS38 261 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ZNF613Q6PF04 617 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 C6orf89Q6UWU4 347 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 CASP12Q6UXS9 341 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 BHLHA15Q7RTS1 189 aaPredicted RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 NUFIP2Q7Z417 695 aaKnown RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 ATG4DQ86TL0 474 aaPredicted RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 CXorf67Q86X51 503 aaPredicted RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 CDC20BQ86Y33 519 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 CCDC103Q8IW40 242 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 GABRG1Q8N1C3 465 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 C10orf53Q8N6V4 93 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 POMGNT2Q8NAT1 580 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 OR2T12Q8NG77 320 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 MFSD8Q8NHS3 518 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 C10orf82Q8WW14 230 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 LZICQ8WZA0 190 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 SLC38A4Q969I6 547 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 PIGTQ969N2 578 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 C3orf49Q96BT1 292 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 S100PBPQ96BU1 408 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ZNF775Q96BV0 537 aaPredicted RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 SLC25A36Q96CQ1 311 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 PIK3IP1Q96FE7 263 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 LRRC37BQ96QE4 947 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ZNF300Q96RE9 604 aaPredicted RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 HOPXQ9BPY8 73 aaPredicted RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 ELAC2Q9BQ52 826 aaKnown RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 ASPNQ9BXN1 380 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 IKZF5Q9H5V7 419 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 TAS2R16Q9NYV7 291 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ARMCX1Q9P291 453 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 RASD1Q9Y272 281 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 B3GALT5Q9Y2C3 310 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 SH3GLB1Q9Y371 365 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 CORINQ9Y5Q5 1042 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 CCDC168Q8NDH2 2452 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 CSMD2Q7Z408 3487 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 APCP25054 2843 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TRAV36DV7A0A075B6V5 113 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 A0A087WUJ7 227 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 A0A0B4J2E0 115 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 A0A1B0GWA3 101 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 A0A1B0GX12 115 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 ELOVL7A1L3X0 281 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 OR5H1A6NKK0 313 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 AQP7P3A6NL99 342 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 ZNF716A6NP11 495 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TMEM229AB2RXF0 380 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 ZNF814B7Z6K7 855 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 DYNC1I1O14576 645 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 GSTA4O15217 222 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 CHP2O43745 196 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 AKAP8O43823 692 aaKnown RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 SNX3O60493 162 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TPST1O60507 370 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 NPIPB7O75200 414 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 GCM2O75603 506 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 RAD51DO75771 328 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 DCTN3O75935 186 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 LYZL6O75951 148 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 OR6A2O95222 327 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MT-ATP6P00846 226 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 IGHV3-9P01782 118 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 OPN1SWP03999 348 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 HIST1H2ABP04908 130 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 IMPDH2P12268 514 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 COX4I1P13073 169 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 PAX7P23759 505 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 HTR2AP28223 471 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MPGP29372 298 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 CCKARP32238 428 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 NUDT2P50583 147 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MNAT1P51948 309 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 ART1P52961 327 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 IST1P53990 364 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 SEC24CP53992 1094 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 GNGT1P63211 74 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 DMTNQ08495 405 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 FAPQ12884 760 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 PMS2P3Q13401 168 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 SELPLGQ14242 412 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 PPA1Q15181 289 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 POU4F3Q15319 338 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 OR1Q1Q15612 314 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 DUSP7Q16829 419 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 LRRC23Q53EV4 343 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 ENTPD8Q5MY95 495 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms