RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 POTEKPQ9BYX7 375 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 OR10A4Q9H209 315 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 ARMC7Q9H6L4 198 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 ZNF446Q9NWS9 450 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 THUMPD1Q9NXG2 353 aaKnown RBP11.03□□□□□ -0.64
SMAD3-208ENST00000558827 LEF1Q9UJU2 399 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-208ENST00000558827 NDUFAF1Q9Y375 327 aa11.03□□□□□ -0.64
SMAD3-208ENST00000558827 NF1P21359 2839 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 A0A1B0GWA3 101 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 TRIM64A6NGJ6 449 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 TRIM64BA6NI03 449 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 H7C1Q1 480 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 ANGPT2O15123 496 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 ARHGEF9O43307 516 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 EIF1BO60739 113 aaKnown RBP11.02□□□□□ -0.65
SMAD3-208ENST00000558827 SOD3P08294 240 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 ITGA5P08648 1049 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 SLC6A2P23975 617 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
SMAD3-208ENST00000558827 CDKN1AP38936 164 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 PTH2RP49190 550 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 SLC16A1P53985 500 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 DMTNQ08495 405 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 SPOCK1Q08629 439 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 NFYCQ13952 458 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 PAQR6Q6TCH4 344 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 TMEM171Q8WVE6 324 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF385DQ9H6B1 395 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 ESRP2Q9H6T0 727 aaKnown RBP11.02□□□□□ -0.65
SMAD3-208ENST00000558827 NGBQ9NPG2 151 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 DLL4Q9NR61 685 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 FGFR1OP2Q9NVK5 253 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 ASB6Q9NWX5 421 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 PLCE1Q9P212 2302 aa11.02□□□□□ -0.65
SMAD3-208ENST00000558827 NIPBLQ6KC79 2804 aaeCLIP11.02□□□□□ -0.65
SMAD3-208ENST00000558827 OR5H1A6NKK0 313 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 AQP7P3A6NL99 342 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 TMEM229AB2RXF0 380 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 M0R1B8 84 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 M0R3H8 397 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 ABCD4O14678 606 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 DNPH1O43598 174 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 AHSA1O95433 338 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 VIMP08670 466 aaKnown RBP11.01□□□□□ -0.65
SMAD3-208ENST00000558827 ETS2P15036 469 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 GPX2P18283 190 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 COX5AP20674 150 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 PPIBP23284 216 aaKnown RBP11.01□□□□□ -0.65
SMAD3-208ENST00000558827 SELENOPP49908 381 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 RGS8P57771 180 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-208ENST00000558827 IL1RL1Q01638 556 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 EGR4Q05215 589 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 GABRA6Q16445 453 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 CYP51A1Q16850 503 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 PRAMEF8Q5VWM4 474 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 PRAMEF7Q5VXH5 474 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 SHEQ5VZ18 495 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 NIPAL3Q6P499 406 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 KRT73Q86Y46 540 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 PTOV1Q86YD1 416 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 PIAS4Q8N2W9 510 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF611Q8N823 705 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 WDR31Q8NA23 367 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 TAAR8Q969N4 342 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 CGREF1Q99674 301 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 RABEP2Q9H5N1 569 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 SLC13A4Q9UKG4 626 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 TRIM33Q9UPN9 1127 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 SLC9A8Q9Y2E8 581 aa11.01□□□□□ -0.65
SMAD3-208ENST00000558827 LRRN3E7EW58 273 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 M0QX08 132 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 FBP2O00757 339 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 TPST2O60704 377 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 KRT33AO76009 404 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 LGI1O95970 557 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 PNMTP11086 282 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 PRKAR1BP31321 381 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 P2RY4P51582 365 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 ATP5J2P56134 94 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 RIPPLY3P57055 190 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 TUBA1BP68363 451 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 TUBA4AP68366 448 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 SLC25A3Q00325 362 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 GUCY1A3Q02108 690 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 OR1Q1Q15612 314 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 ZNF672Q499Z4 452 aaPredicted RBP11□□□□□ -0.65
SMAD3-208ENST00000558827 HIKESHIQ53FT3 197 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 TIMM23BQ5SRD1 257 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 CGB2Q6NT52 195 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 DHRS4L2Q6PKH6 230 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 TUBA1AQ71U36 451 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 RBM45Q8IUH3 476 aaKnown RBP11□□□□□ -0.65
SMAD3-208ENST00000558827 ARMC8Q8IUR7 673 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 EPHX4Q8IUS5 362 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 HIPK4Q8NE63 616 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 OR10A6Q8NH74 314 aa11□□□□□ -0.65
SMAD3-208ENST00000558827 VANGL1Q8TAA9 524 aaPredicted RBP11□□□□□ -0.65
SMAD3-208ENST00000558827 SMAP2Q8WU79 429 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms