RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 FOXC2Q99958 501 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 CXXC4Q9H2H0 198 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 LIME1Q9H400 295 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 LIN28AQ9H9Z2 209 aaKnown RBP12.21□□□□□ -0.45
TMED3-205ENST00000558562 EXOSC3Q9NQT5 275 aaKnown RBP12.21□□□□□ -0.45
TMED3-205ENST00000558562 RASSF1Q9NS23 344 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 SELENONQ9NZV5 590 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 CNIH4Q9P003 139 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 LRFN1Q9P244 771 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 AASSQ9UDR5 926 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 TMEM5Q9Y2B1 443 aa12.21□□□□□ -0.45
TMED3-205ENST00000558562 A0A1B0GTH9 108 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 A0A1W2PQD3 144 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 OR6C70A6NIJ9 312 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 TMEM200CA6NKL6 621 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 ZNF264O43296 627 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 OIP5O43482 229 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 ADAM11O75078 769 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 PPM1BO75688 479 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 TFAP2AP05549 437 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 IGFBP1P08833 259 aaPredicted RBP12.2□□□□□ -0.46
TMED3-205ENST00000558562 MSX1P28360 303 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 PTGS2P35354 604 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 RFC3P40938 356 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 CCR4P51679 360 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 CXCR4P61073 352 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 COPZ1P61923 177 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 TEKQ02763 1124 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 SKP2Q13309 424 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 ALG10BQ5I7T1 473 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 C12orf73Q69YU5 71 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 DESI1Q6ICB0 168 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 ZNF773Q6PK81 442 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 WDR88Q6ZMY6 472 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 RASSF6Q6ZTQ3 369 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 KIF18BQ86Y91 864 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 P3H2Q8IVL5 708 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 RPRMLQ8N4K4 120 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 LSMEM1Q8N8F7 131 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 POGLUT1Q8NBL1 392 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 LILRB4Q8NHJ6 448 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 APH1BQ8WW43 257 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 UBE2FQ969M7 185 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 MPP4Q96JB8 637 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 TBL1XR1Q9BZK7 514 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 LAT2Q9GZY6 243 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 DSN1Q9H410 356 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 SCN3BQ9NY72 215 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 ZNF226Q9NYT6 803 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 TPRKBQ9Y3C4 175 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 MED31Q9Y3C7 131 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 NPFFR2Q9Y5X5 522 aa12.2□□□□□ -0.46
TMED3-205ENST00000558562 ALG1L2C9J202 215 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 M0R129 80 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 WWP2O00308 870 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 KLF4O43474 513 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 MPZL2O60487 215 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 CDC40O60508 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
TMED3-205ENST00000558562 WBP4O75554 376 aaKnown RBP12.19□□□□□ -0.46
TMED3-205ENST00000558562 SLC25A12O75746 678 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 OR6B1O95007 311 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 LINGO3P0C6S8 592 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 IFI30P13284 250 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 ENDOUP21128 410 aaKnown RBP12.19□□□□□ -0.46
TMED3-205ENST00000558562 CHRNB4P30926 498 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 EVI2BP34910 448 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 RBM34P42696 430 aaKnown RBP12.19□□□□□ -0.46
TMED3-205ENST00000558562 PRKCDQ05655 676 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 EXT1Q16394 746 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 ULK3Q6PHR2 472 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 CASP12Q6UXS9 341 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 APOOLQ6UXV4 268 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 C16orf47Q6ZP98 133 aaPredicted RBP12.19□□□□□ -0.46
TMED3-205ENST00000558562 Q71RC1 249 aaPredicted RBP12.19□□□□□ -0.46
TMED3-205ENST00000558562 SATL1Q86VE3 508 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 PFN4Q8NHR9 129 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 RHOXF1Q8NHV9 184 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 FAM57AQ8TBR7 257 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 M1APQ8TC57 530 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 DNAJA4Q8WW22 397 aaPredicted RBP12.19□□□□□ -0.46
TMED3-205ENST00000558562 ASB5Q8WWX0 329 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 DEFB126Q9BYW3 111 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 FAM192AQ9GZU8 254 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 CDCP1Q9H5V8 836 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 SLC25A19Q9HC21 320 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 MMP25Q9NPA2 562 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 KCNJ16Q9NPI9 418 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 TBC1D23Q9NUY8 699 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 KCNN3Q9UGI6 736 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 CARD8Q9Y2G2 431 aa12.19□□□□□ -0.46
TMED3-205ENST00000558562 UNC119BA6NIH7 251 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 KPNA4O00629 521 aaPredicted RBP12.18□□□□□ -0.46
TMED3-205ENST00000558562 NDUFB5O43674 189 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 SCO2O43819 266 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 XPNPEP2O43895 674 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 NME2P1O60361 137 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 EIF4E2O60573 245 aaKnown RBP12.18□□□□□ -0.46
TMED3-205ENST00000558562 HOXD4P09016 255 aaPredicted RBP12.18□□□□□ -0.46
TMED3-205ENST00000558562 GABRB1P18505 474 aa12.18□□□□□ -0.46
TMED3-205ENST00000558562 NME2P22392 152 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms