RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 APOBEC1P41238 236 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 CYB561P49447 251 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 AIMP2Q13155 320 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 AADACL4Q5VUY2 407 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 GTF2IRD2BQ6EKJ0 949 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 TMEM81Q6P7N7 255 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 IGF2-ASQ6U949 168 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 LINC00696Q6ZRV3 163 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 CXXC5Q7LFL8 322 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 NANOGNBQ7Z5D8 188 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 GTF2IRD2Q86UP8 949 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 GHDCQ8N2G8 530 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 PSD4Q8NDX1 1056 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 LIPHQ8WWY8 451 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 IP6K3Q96PC2 410 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 KATNB1Q9BVA0 655 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 FAM192AQ9GZU8 254 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 ACOT13Q9NPJ3 140 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 CMC2Q9NRP2 79 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 RPH3AQ9Y2J0 694 aaPredicted RBP18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 HIF3AQ9Y2N7 669 aa18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 RPL36Q9Y3U8 105 aaKnown RBP18.45■□□□□ 0.54
SNRPA1-205ENST00000558036 SMIM31A0A1B0GVY4 71 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 A6NL46 340 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 KDM4EB2RXH2 506 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 DXOO77932 396 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 CRMP1Q14194 572 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 ABHD17BQ5VST6 288 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 SLC6A19Q695T7 634 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 JMJD6Q6NYC1 403 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 SHFQ7M4L6 423 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 OR4K13Q8NH42 304 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 UBL7Q96S82 380 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 PTGES2Q9H7Z7 377 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 ZNF229Q9UJW7 825 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 PCDHGB1Q9Y5G3 927 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 CEPT1Q9Y6K0 416 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 DLL1O00548 723 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 LCKP06239 509 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 HIST1H1CP16403 213 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 JUNBP17275 347 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 UQCRC1P31930 480 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 CD96P40200 585 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 RPL18Q07020 188 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 RSPO4Q2I0M5 234 aaPredicted RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 ALG10Q5BKT4 473 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 FAM69AQ5T7M9 428 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 OR1J4Q8NGS1 313 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 MUL1Q969V5 352 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 MRGPRX4Q96LA9 322 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 FER1L6-AS2Q96M78 137 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 FKRPQ9H9S5 495 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 CNOT2Q9NZN8 540 aaKnown RBP18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 TEKT2Q9UIF3 430 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 CPAMD8Q8IZJ3 1885 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 DOCK10Q96BY6 2186 aa18.44■□□□□ 0.54
SNRPA1-205ENST00000558036 ETV2O00321 342 aaPredicted RBP18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 IMPA2O14732 288 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 AHSA1O95433 338 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 P04436 131 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 CLUP10909 449 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 GP2P55259 537 aaKnown RBP18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 CDH11P55287 796 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 PRPS1P60891 318 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 C19orf57Q0VDD7 668 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 DPY19L2P2Q6ZN68 376 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 SDR9C7Q8NEX9 313 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 OR52E2Q8NGJ4 325 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 NTNG2Q96CW9 530 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 RASD2Q96D21 266 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 RNFT2Q96EX2 444 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 NRIP3Q9NQ35 241 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 DEPPQ9NTK1 212 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 PLA2G3Q9NZ20 509 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 LRFN1Q9P244 771 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 HTR3EA5X5Y0 456 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 TRABD2BA6NFA1 517 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 RIIAD1A6NNX1 92 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 SNPHO15079 494 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 HIST1H2ABP04908 130 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 GRPRP30550 384 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 DLX5P56178 289 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 HIST3H2AQ7L7L0 130 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 STK35Q8TDR2 534 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 HIST1H2ACQ93077 130 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 PTP4A1Q93096 173 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 SIGLEC12Q96PQ1 595 aa18.43■□□□□ 0.54
SNRPA1-205ENST00000558036 ANKRD33BA6NCL7 494 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 C11orf98E9PRG8 122 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 GYPBP06028 91 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 TFPIP10646 304 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 HK1P19367 917 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 SPINK2P20155 84 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 DPP4P27487 766 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 MTNR1AP48039 350 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 ITGADQ13349 1161 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 SLC25A53Q5H9E4 307 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 GPR107Q5VW38 600 aa18.42■□□□□ 0.54
SNRPA1-205ENST00000558036 NXNL2Q5VZ03 156 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms