RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 MRPL33O75394 65 aaKnown RBP7.42□□□□□ -1.22
PSEN1-223ENST00000557511 VAMP5O95183 116 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 GOSR1O95249 250 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 LGI1O95970 557 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 PRG2P13727 222 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 PPP3CBP16298 524 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 IL32P24001 234 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 PCYT1AP49585 367 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 SLC7A2P52569 658 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 PCBP3P57721 371 aaKnown RBP7.42□□□□□ -1.22
PSEN1-223ENST00000557511 HOXC5Q00444 222 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 LIPEQ05469 1076 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 DMTNQ08495 405 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 CEACAM7Q14002 265 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 PDK3Q15120 406 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 OR1Q1Q15612 314 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 OTUD3Q5T2D3 398 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-223ENST00000557511 ZNF613Q6PF04 617 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 PAQR6Q6TCH4 344 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 C16orf89Q6UX73 402 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 CCDC80Q76M96 950 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 ATG4DQ86TL0 474 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-223ENST00000557511 MICU2Q8IYU8 434 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 UBE2J2Q8N2K1 259 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 C10orf111Q8N326 155 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 ZNF610Q8N9Z0 462 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 CCDC197Q8NCU1 140 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 STEAP2Q8NFT2 490 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 VANGL1Q8TAA9 524 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-223ENST00000557511 FAM162AQ96A26 154 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 C3orf49Q96BT1 292 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 SLC25A36Q96CQ1 311 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 DNAJA3Q96EY1 480 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 ARL5BQ96KC2 179 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 DACH2Q96NX9 599 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 CCT8L2Q96SF2 557 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 KCTD14Q9BQ13 255 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-223ENST00000557511 HDHD5Q9BXW7 423 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 BCO1Q9HAY6 547 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 MCCC2Q9HCC0 563 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 SPAG4Q9NPE6 437 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 ADA2Q9NZK5 511 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 CRIM1Q9NZV1 1036 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 TAGLN3Q9UI15 199 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 SH3GLB1Q9Y371 365 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 PTPN13Q12923 2485 aa7.42□□□□□ -1.22
PSEN1-223ENST00000557511 SPTAN1Q13813 2472 aaKnown RBP7.42□□□□□ -1.22
PSEN1-223ENST00000557511 NCOA6Q14686 2063 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-223ENST00000557511 ICE1Q9Y2F5 2266 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 ASH1LQ9NR48 2969 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 TRAV36DV7A0A075B6V5 113 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 CCT8L1PA6NM43 557 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 CPSF4LA6NMK7 179 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 M0R3H8 397 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 AKAP8O43823 692 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 KRT33AO76009 404 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 OR6A2O95222 327 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 FAM107AO95990 144 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 HIST1H2ABP04908 130 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 FREM3P0C091 2139 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 NQO1P15559 274 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 IGFBP2P18065 325 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 KDELR2P33947 212 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 TAS2R41P59536 307 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 PSME3P61289 254 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 FAM27E3Q08E93 113 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 BNIP2Q12982 314 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 SNTB1Q13884 538 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 C1DQ13901 141 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 DUSP7Q16829 419 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 GLIPR1L2Q4G1C9 344 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 FAM69AQ5T7M9 428 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 TTC33Q6PID6 262 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 CASP12Q6UXS9 341 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 FKBP9P1Q75LS8 142 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 HIST3H2AQ7L7L0 130 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 ABHD12BQ7Z5M8 362 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 PIGWQ7Z7B1 504 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 GPAT4Q86UL3 456 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 CYP4Z1Q86W10 505 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 CALHM3Q86XJ0 350 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 WFDC8Q8IUA0 241 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 MFSD8Q8NHS3 518 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 LINC01560Q8TB33 94 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 HIST1H2ACQ93077 130 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 APH1AQ96BI3 265 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 TPD52L3Q96J77 140 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 MPP4Q96JB8 637 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 ZNF583Q96ND8 569 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 ARHGDIGQ99819 225 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 PSD2Q9BQI7 771 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 SF3B5Q9BWJ5 86 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 ASPNQ9BXN1 380 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 POLDIP3Q9BY77 421 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 POLR2J2Q9GZM3 115 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 POLR2J3Q9H1A7 115 aaKnown RBP7.41□□□□□ -1.22
PSEN1-223ENST00000557511 MYLK2Q9H1R3 596 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 NGBQ9NPG2 151 aa7.41□□□□□ -1.22
PSEN1-223ENST00000557511 UPB1Q9UBR1 384 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms