RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ADPRHL2Q9NX46 363 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 ASIC5Q9NY37 505 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.25□□□□□ -0.45
SLIRP-210ENST00000557431 TRAPPC4Q9Y296 219 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 V9GYY5 206 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-210ENST00000557431 PRSS51A0A1B0GVH4 220 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 LIPT2A6NK58 231 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 LYNX1G3V0Z9 82 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 EIF1BO60739 113 aaKnown RBP12.24□□□□□ -0.45
SLIRP-210ENST00000557431 UPK3AO75631 287 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 KRT33AO76009 404 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 WNT11O96014 354 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 NUDT17P0C025 328 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 OR4A8P0C604 315 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 CECR9P0C854 216 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 LYNX1P0DP58 116 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 CLK1P49759 484 aaKnown RBP12.24□□□□□ -0.45
SLIRP-210ENST00000557431 TGFBR3Q03167 851 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 TRIP10Q15642 601 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 FAM174BQ3ZCQ3 159 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 NIPAL3Q6P499 406 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 ZNF836Q6ZNA1 936 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 KDM8Q8N371 416 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 CADM2Q8N3J6 435 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 TMEM45BQ96B21 275 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 KCNS3Q9BQ31 491 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 PARPBPQ9NWS1 579 aa12.24□□□□□ -0.45
SLIRP-210ENST00000557431 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 SH3PXD2BA1X283 911 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 ZNF503-AS2A6NEH8 195 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 CFAP73A6NFT4 308 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 AGAP5A6NIR3 686 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 AQP7P3A6NL99 342 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 ZNF208O43345 1280 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 FRS3O43559 492 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 SEC14L2O76054 403 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 STAMBPO95630 424 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 AGR2O95994 175 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 PRG2P13727 222 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 IL7RP16871 459 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 ZNF23P17027 643 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 ITGA2P17301 1181 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 RPS4Y1P22090 263 aaKnown RBP12.23□□□□□ -0.45
SLIRP-210ENST00000557431 SERPINB5P36952 375 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 SERPINF1P36955 418 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 SLC1A3P43003 542 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 ETV4P43268 484 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 HTR3AP46098 478 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 P2RY4P51582 365 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 UFM1P61960 85 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 NAAAQ02083 359 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 MAPK11Q15759 364 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 CHI3L2Q15782 390 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 RPS26P11Q5JNZ5 115 aaPredicted RBP12.23□□□□□ -0.45
SLIRP-210ENST00000557431 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 SVOPLQ8N434 492 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 PARD6BQ9BYG5 372 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 NUF2Q9BZD4 464 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 SEC14L4Q9UDX3 406 aa12.23□□□□□ -0.45
SLIRP-210ENST00000557431 ZNF587BE7ETH6 402 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 hCG_2039718K7EN88 272 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 NDUFS8O00217 210 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 GPIP06744 558 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 IGFBP1P08833 259 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-210ENST00000557431 ALDOCP09972 364 aaKnown RBP12.22□□□□□ -0.45
SLIRP-210ENST00000557431 HNF1AP20823 631 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 CXCR1P25024 350 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 IL12AP29459 219 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 THBS4P35443 961 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 UBE2NP61088 152 aaKnown RBP12.22□□□□□ -0.45
SLIRP-210ENST00000557431 HGFACQ04756 655 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 CCNIQ14094 377 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 ANXA8L1Q5VT79 327 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 AP1ARQ63HQ0 302 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 TMEM225Q6GV28 225 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 ANKRD16Q6P6B7 361 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 RINLQ6ZS11 566 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-210ENST00000557431 POMGNT2Q8NAT1 580 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 BCL2L2Q92843 193 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-210ENST00000557431 SNX18Q96RF0 628 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 SORT1Q99523 831 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 ADAM19Q9H013 955 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 TPK1Q9H3S4 243 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 SLC6A13Q9NSD5 602 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 TMEM45AQ9NWC5 275 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 LGALS13Q9UHV8 139 aa12.22□□□□□ -0.45
SLIRP-210ENST00000557431 CCDC154A6NI56 674 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 B9A039 149 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 E9PBE3 544 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 TYROBPO43914 113 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 LILRA1O75019 489 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 RGS9O75916 674 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-210ENST00000557431 CRYAAP02489 173 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 GUSBP08236 651 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 NR2F1P10589 423 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 APEX1P27695 318 aaKnown RBP12.21□□□□□ -0.45
SLIRP-210ENST00000557431 S100A3P33764 101 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 THBS2P35442 1172 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 ACAA2P42765 397 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms