RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 KIAA1024LP59773 190 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 RPS15AP62244 130 aaKnown RBP10.46□□□□□ -0.74
SRP54-213ENST00000556994 SRSF5Q13243 272 aaKnown RBP10.46□□□□□ -0.74
SRP54-213ENST00000556994 BTN1A1Q13410 526 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 HTR4Q13639 388 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 C2orf27AQ580R0 203 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 NHLRC3Q5JS37 347 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 FAM69AQ5T7M9 428 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 ARHGAP11AQ6P4F7 1023 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 BAIAP2L2Q6UXY1 529 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 GLDNQ6ZMI3 551 aaPredicted RBP10.46□□□□□ -0.74
SRP54-213ENST00000556994 C3P1Q6ZMU1 363 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 UXS1Q8NBZ7 420 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 OR4N2Q8NGD1 307 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 CCL4L1Q8NHW4 92 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 COQ8AQ8NI60 647 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 SPPL3Q8TCT6 385 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 SLC2A12Q8TD20 617 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 FCAMRQ8WWV6 532 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 WBP1Q96G27 269 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 FGF22Q9HCT0 170 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 NANSQ9NR45 359 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 CHRNA9Q9UGM1 479 aa10.46□□□□□ -0.74
SRP54-213ENST00000556994 PLSCR5A0PG75 271 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 PRR32B1ATL7 298 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 ZNF879B4DU55 563 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 GABARAPH6UMI1 98 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 LGALS8O00214 317 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 BRINP1O60477 761 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 HOXD4P09016 255 aaPredicted RBP10.45□□□□□ -0.74
SRP54-213ENST00000556994 PTH2RP49190 550 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 UBE2MP61081 183 aaKnown RBP10.45□□□□□ -0.74
SRP54-213ENST00000556994 ACTA2P62736 377 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 ACTG2P63267 376 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 STX4Q12846 297 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 TUSC1Q2TAM9 212 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 NDUFAF6Q330K2 333 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 TMEM69Q5SWH9 247 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 ZNF613Q6PF04 617 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 ALKAL2Q6UX46 152 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 SYS1Q8N2H4 156 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 CDRT4Q8N9R6 151 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 DNAAF1Q8NEP3 725 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 OR14C36Q8NHC7 312 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 HSPA12BQ96MM6 686 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 OR2A5Q96R48 311 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 OR1F2PQ96R84 312 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 SERINC2Q96SA4 455 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 MS4A7Q9GZW8 240 aaPredicted RBP10.45□□□□□ -0.74
SRP54-213ENST00000556994 SRMSQ9H3Y6 488 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 SDHAF2Q9NX18 166 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 THAP10Q9P2Z0 257 aaPredicted RBP10.45□□□□□ -0.74
SRP54-213ENST00000556994 ICAM5Q9UMF0 924 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 KCNMB2Q9Y691 235 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 SLC22A7Q9Y694 548 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 RANBP2P49792 3224 aaKnown RBP10.45□□□□□ -0.74
SRP54-213ENST00000556994 ALPK2Q86TB3 2170 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 SZT2Q5T011 3432 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 A0A1B0GUH1 482 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 A0A1W2PQU0 124 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 hCG_1807616A0A1W2PRN6 198 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 OR6C68A6NDL8 312 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 GPR89AB7ZAQ6 455 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 AIPO00170 330 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 FMO6PO60774 539 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 ZFPL1O95159 310 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 GPR89BP0CG08 455 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 NFYAP23511 347 aaPredicted RBP10.45□□□□□ -0.74
SRP54-213ENST00000556994 CDK2P24941 298 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 IGFALSP35858 605 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 ACAA2P42765 397 aaKnown RBP10.45□□□□□ -0.74
SRP54-213ENST00000556994 SOX2P48431 317 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 P2RX1P51575 399 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 PPP2CBP62714 309 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 PPP2CAP67775 309 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 PLA2G7Q13093 441 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 FAM53BQ14153 422 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 PON3Q15166 354 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 UNQ9370/PRO34162Q6UXP9 181 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 DGAT2L6Q6ZPD8 337 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 ZBTB44Q8NCP5 570 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 OR10G6Q8NH81 332 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 RGP1Q92546 391 aaPredicted RBP10.45□□□□□ -0.74
SRP54-213ENST00000556994 RASD2Q96D21 266 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 KLHL15Q96M94 604 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 REG4Q9BYZ8 158 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 C12orf10Q9HB07 376 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 DUSP22Q9NRW4 184 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 TAS2R10Q9NYW0 307 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 OR5V1Q9UGF6 321 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 SERTAD3Q9UJW9 196 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 FOXJ3Q9UPW0 622 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 SLC17A4Q9Y2C5 497 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 COLEC10Q9Y6Z7 277 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 CACNA1CQ13936 2221 aa10.45□□□□□ -0.74
SRP54-213ENST00000556994 PRR19A6NJB7 356 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 GRXCR1A8MXD5 290 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 TRIM77I1YAP6 450 aa10.44□□□□□ -0.74
SRP54-213ENST00000556994 NUPL2O15504 423 aaKnown RBP10.44□□□□□ -0.74
SRP54-213ENST00000556994 PRAF2O60831 178 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms