RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 DECR2Q9NUI1 292 aa4.85□□□□□ -1.63
ATXN3-245ENST00000556958 NKIRAS2Q9NYR9 191 aa4.85□□□□□ -1.63
ATXN3-245ENST00000556958 UBAP1Q9NZ09 502 aa4.85□□□□□ -1.63
ATXN3-245ENST00000556958 OPTCQ9UBM4 332 aa4.85□□□□□ -1.63
ATXN3-245ENST00000556958 SLC9A8Q9Y2E8 581 aa4.85□□□□□ -1.63
ATXN3-245ENST00000556958 ARFGEF3Q5TH69 2177 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 A0A087WV62 115 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 IGHV2OR16-5A0A0B4J2B6 119 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 ZNF816-ZNF321PA0A0X1KG74 233 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 MDFIC2A0A1B0GVS7 189 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 A0A1W2PPW3 197 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 WI2-2373I1.2A0A1W2PRP0 233 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TCRBV7S2A1N4TA0A589 114 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 ISPDA4D126 451 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 ZNF716A6NP11 495 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 H3BNH8 94 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TRAPPC2LH3BP13 241 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 K7EPI3 171 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 SCDO00767 359 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 PRODHO43272 600 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TPD52L2O43399 206 aaKnown RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TSPAN9O75954 239 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 OXSR1O95747 527 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 IGKV3-15P01624 115 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 FAM153BP0C7A2 387 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 LMO1P25800 156 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 FKBP2P26885 142 aaKnown RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TYK2P29597 1187 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 GABRA3P34903 492 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 GLRXP35754 106 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 ECI1P42126 302 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 PRIM2P49643 509 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 DIO1P49895 249 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 PGGT1BP53609 377 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 SLC16A1P53985 500 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 SUMO3P55854 103 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TRA2BP62995 288 aaKnown RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 CCL8P80075 99 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 MOGQ16653 247 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 VPS26BQ4G0F5 336 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TTMPQ5BVD1 217 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 FAM209AQ5JX71 171 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TSPO2Q5TGU0 170 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 GKAP1Q5VSY0 366 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 KRT80Q6KB66 452 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 C3orf33Q6P1S2 294 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 Q6ZSV7 163 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 RNF144BQ7Z419 303 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 MTERF4Q7Z6M4 381 aaKnown RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 CCDC36Q8IYA8 594 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 C1orf174Q8IYL3 243 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 FAM9CQ8IZT9 166 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 GATSQ8NAP1 163 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 Q8NFD4 153 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 OR9A2Q8NGT5 310 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 SNX33Q8WV41 574 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 C1orf54Q8WWF1 131 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 LRTOMTQ8WZ04 291 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 UPRTQ96BW1 309 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 LRRC39Q96DD0 335 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 SIGLEC10Q96LC7 697 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 DIRC2Q96SL1 478 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 BPIFA3Q9BQP9 254 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TRIM5Q9C035 493 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TMEM165Q9HC07 324 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 HINT3Q9NQE9 182 aaKnown RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 UBQLN4Q9NRR5 601 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 SLAMF8Q9P0V8 285 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 OR5V1Q9UGF6 321 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 NFU1Q9UMS0 254 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 TMA7Q9Y2S6 64 aaKnown RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 ANGPTL3Q9Y5C1 460 aa4.84□□□□□ -1.63
ATXN3-245ENST00000556958 SOX21Q9Y651 276 aaPredicted RBP4.84□□□□□ -1.63
ATXN3-245ENST00000556958 A0A1W2PQD3 144 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 TCRBV7S3A2A0A539 114 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 TLDC2A0PJX2 215 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 SLC22A23A1A5C7 686 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 C17orf100A8MU93 164 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 TRIM49D1C9J1S8 452 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 H0YL77 283 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 GTPBP1O00178 669 aaKnown RBP4.83□□□□□ -1.64
ATXN3-245ENST00000556958 DNPH1O43598 174 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 UGDHO60701 494 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 NCR1O76036 304 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 DUS4LO95620 317 aaKnown RBP4.83□□□□□ -1.64
ATXN3-245ENST00000556958 ESRRBO95718 433 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 MT-ND5P03915 603 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 TPM3P06753 285 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 MELTFP08582 738 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 OR12D1P0DN82 309 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 CD80P33681 288 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 TGFBR2P37173 567 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 MAGEB1P43366 347 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 P2RX1P51575 399 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 SLC12A2P55011 1212 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 DBPQ10586 325 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-245ENST00000556958 ILF2Q12905 390 aaKnown RBP4.83□□□□□ -1.64
ATXN3-245ENST00000556958 LCP2Q13094 533 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 SPA17Q15506 151 aa4.83□□□□□ -1.64
ATXN3-245ENST00000556958 TRADDQ15628 312 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms