RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TRAV36DV7A0A075B6V5 113 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 FTCDNL1E5RQL4 147 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 LRRN3E7EW58 273 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 hCG_2039718K7EN88 272 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 DNPH1O43598 174 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 DNAJC8O75937 253 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 SMNDC1O75940 238 aaKnown RBP eCLIP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 CRHP06850 196 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 H3F3AP84243 136 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 TRIM25Q14258 630 aaKnown RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 OTUD3Q5T2D3 398 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 GTF2IRD2BQ6EKJ0 949 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 FAM214BQ7L5A3 538 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 TSEN54Q7Z6J9 526 aaKnown RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 LUZP2Q86TE4 346 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 GTF2IRD2Q86UP8 949 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 DHFR2Q86XF0 187 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 NKAIN4Q8IVV8 208 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 SLC43A2Q8N370 569 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 MFSD8Q8NHS3 518 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 TMEM255BQ8WV15 326 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF775Q96BV0 537 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 PYURFQ96I23 114 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 TMEM43Q9BTV4 400 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 CADM1Q9BY67 442 aaKnown RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 POLR2J2Q9GZM3 115 aaKnown RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 POLR2J3Q9H1A7 115 aaKnown RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 MUC13Q9H3R2 512 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 C12orf49Q9H741 205 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 GLRX2Q9NS18 164 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 KLHL9Q9P2J3 617 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 SEC14L4Q9UDX3 406 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 PLEKHB1Q9UF11 243 aaPredicted RBP15.58■□□□□ 0.08
SHMT2-225ENST00000556798 EMC9Q9Y3B6 208 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 HECTD1Q9ULT8 2610 aa15.58■□□□□ 0.08
SHMT2-225ENST00000556798 FFAR1O14842 300 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 EIF1BO60739 113 aaKnown RBP15.57■□□□□ 0.08
SHMT2-225ENST00000556798 SEMG1P04279 462 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 COL8A1P27658 744 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 GTF2E2P29084 291 aaKnown RBP15.57■□□□□ 0.08
SHMT2-225ENST00000556798 UGT2B15P54855 530 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 VLDLRP98155 873 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 TFF3Q07654 80 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 FAM69AQ5T7M9 428 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 LCN8Q6JVE9 175 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 TTC33Q6PID6 262 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-225ENST00000556798 PAQR6Q6TCH4 344 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 C5orf46Q6UWT4 87 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 NUFIP2Q7Z417 695 aaKnown RBP15.57■□□□□ 0.08
SHMT2-225ENST00000556798 OFCC1Q8IZS5 231 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 C10orf53Q8N6V4 93 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 PIGXQ8TBF5 258 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 ASB9Q96DX5 294 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 MPP4Q96JB8 637 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 EPYCQ99645 322 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 NAA11Q9BSU3 229 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF426Q9BUY5 554 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 OPN3Q9H1Y3 402 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-225ENST00000556798 NPDC1Q9NQX5 325 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-225ENST00000556798 KLF2Q9Y5W3 355 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-225ENST00000556798 ENPP4Q9Y6X5 453 aa15.57■□□□□ 0.08
SHMT2-225ENST00000556798 TCRBV5S2A0A599 114 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF716A6NP11 495 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 M0R082 166 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 GSC2O15499 205 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 ATP5HO75947 161 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 DIRAS1O95057 198 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 PRSS23O95084 383 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 BGLAPP02818 100 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 GRPRP30550 384 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 ASCL1P50553 236 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 LTBQ06643 244 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 ST3GAL3Q11203 375 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 TMEM201Q5SNT2 666 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 HIST2H2BCQ6DN03 193 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 PGM2L1Q6PCE3 622 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.56■□□□□ 0.08
SHMT2-225ENST00000556798 OR6K3Q8NGY3 331 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 PFN4Q8NHR9 129 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF417Q8TAU3 575 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 MCUR1Q96AQ8 359 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 C7orf34Q96L11 122 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 MOGAT1Q96PD6 335 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 ZNF587Q96SQ5 575 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-225ENST00000556798 SEPHS2Q99611 448 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 FNDC11Q9BVV2 318 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 BCO1Q9HAY6 547 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 MAN2C1Q9NTJ4 1040 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 NDUFAF4Q9P032 175 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 JKAMPQ9P055 326 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 C6orf203Q9P0P8 240 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-225ENST00000556798 PROCRQ9UNN8 238 aa15.56■□□□□ 0.08
SHMT2-225ENST00000556798 AQP7P3A6NL99 342 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 ACOT8O14734 319 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 OR2T1O43869 369 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 PIP5K1CO60331 668 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 CGAP01215 116 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 YES1P07947 543 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 THRBP10828 461 aa15.55■□□□□ 0.08
SHMT2-225ENST00000556798 IFNA8P32881 189 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms