RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 TMEM72A0PK05 275 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 SLCO1B7G3V0H7 640 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 ZNF208O43345 1280 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 NPHS1O60500 1241 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 OR12D1P0DN82 309 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 IL2RGP31785 369 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 SLC1A3P43003 542 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 POLR2HP52434 150 aaKnown RBP11□□□□□ -0.65
SHMT2-223ENST00000556689 MAP2K6P52564 334 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 PCLAFQ15004 111 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 OTUD3Q5T2D3 398 aaPredicted RBP11□□□□□ -0.65
SHMT2-223ENST00000556689 ZIC4Q8N9L1 334 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 OR4F15Q8NGB8 312 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 MIPOL1Q8TD10 442 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 ZFAND2BQ8WV99 257 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 ROPN1LQ96C74 230 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 TLCD1Q96CP7 247 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 C3orf30Q96M34 536 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 SF3B5Q9BWJ5 86 aaKnown RBP11□□□□□ -0.65
SHMT2-223ENST00000556689 SAP130Q9H0E3 1048 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 OSGIN1Q9UJX0 560 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 PCDHB14Q9Y5E9 798 aa11□□□□□ -0.65
SHMT2-223ENST00000556689 ARFGEF3Q5TH69 2177 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 RNASET2O00584 256 aaKnown RBP10.99□□□□□ -0.65
SHMT2-223ENST00000556689 SKAP2O75563 359 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-223ENST00000556689 G6PDP11413 515 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 PCMT1P22061 227 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 DVL1P1P54792 670 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-223ENST00000556689 CDH15P55291 814 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 NAAAQ02083 359 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 CEACAM7Q14002 265 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 C3orf36Q3SXR2 165 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 TBRG1Q3YBR2 411 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 TTMPQ5BVD1 217 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 XKR7Q5GH72 579 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 HHATQ5VTY9 493 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 CLECL1Q8IZS7 167 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 ZCCHC24Q8N2G6 241 aaKnown RBP10.99□□□□□ -0.65
SHMT2-223ENST00000556689 ZNF786Q8N393 782 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 TMEM99Q8N816 258 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 OR9K2Q8NGE7 335 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 OR4A15Q8NGL6 344 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 OR1K1Q8NGR3 316 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 AGR3Q8TD06 166 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 UBASH3BQ8TF42 649 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 CNOT9Q92600 299 aaKnown RBP10.99□□□□□ -0.65
SHMT2-223ENST00000556689 RAB8BQ92930 207 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 ZBTB9Q96C00 473 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 ZNF385AQ96PM9 386 aaKnown RBP10.99□□□□□ -0.65
SHMT2-223ENST00000556689 SNX18Q96RF0 628 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 DOK1Q99704 481 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 PIF1Q9H611 641 aa10.99□□□□□ -0.65
SHMT2-223ENST00000556689 CRNNQ9UBG3 495 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-223ENST00000556689 TMEM120BA0PK00 339 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 ZC3H12DA2A288 527 aaKnown RBP10.98□□□□□ -0.65
SHMT2-223ENST00000556689 CLDN24A6NM45 220 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 ZNF587BE7ETH6 402 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 hCG_2039718K7EN88 272 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 AP3D1O14617 1153 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 SPAG7O75391 227 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 AKR7A3O95154 331 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 VENTXO95231 258 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 LGI1O95970 557 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 GPIP06744 558 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 CECR9P0C854 216 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 IFNGR1P15260 489 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 TACR3P29371 465 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 ALDH3A1P30838 453 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 CLDN8P56748 225 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 GPAT3Q53EU6 434 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 TMEM225Q6GV28 225 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 OR4F3Q6IEY1 312 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 TNFAIP8L2Q6P589 184 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-223ENST00000556689 FRRS1Q6ZNA5 592 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 HMGN2P46Q86SG4 172 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 GPAT4Q86UL3 456 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 FAM169BQ8N8A8 192 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 ANKRD42Q8N9B4 389 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 NUP37Q8NFH4 326 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 MAGEE2Q8TD90 523 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-223ENST00000556689 WDR60Q8WVS4 1066 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 BCL2L2Q92843 193 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-223ENST00000556689 TUBGCP3Q96CW5 907 aa10.98□□□□□ -0.65
SHMT2-223ENST00000556689 ZNF317Q96PQ6 595 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-223ENST00000556689 MOV10Q9HCE1 1003 aaKnown RBP10.98□□□□□ -0.65
SHMT2-223ENST00000556689 NUP214P35658 2090 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-223ENST00000556689 ARPC4-TTLL3A0A0A6YYG9 625 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 TMEM129A0AVI4 362 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 SH3PXD2BA1X283 911 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 OR6C65A6NJZ3 312 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 LIPT2A6NK58 231 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 B4DSR2 109 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 NR5A2O00482 541 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 SCN2BO60939 215 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 IGLV1-44P01699 117 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 HOXB1P14653 301 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-223ENST00000556689 EGR1P18146 543 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 NPR2P20594 1047 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 UQCRC2P22695 453 aa10.97□□□□□ -0.65
SHMT2-223ENST00000556689 CALCRP30988 508 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms