RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CRYGCP07315 174 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RETP07949 1114 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 FHP07954 510 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 ANXA4P09525 319 aaPredicted RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 PABPC4LP0CB38 370 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 OR8G3PP0DMU2 310 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 CDH1P12830 882 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 TNNI3P19429 210 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 GGT1P19440 569 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 CD22P20273 847 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 OXTRP30559 389 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 NR4A2P43354 598 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 NPBWR1P48145 328 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RPL23AP62750 156 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 PPP2R2BQ00005 443 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 ROR2Q01974 943 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 CHRNB3Q05901 458 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 TGM3Q08188 693 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 ZNF763Q0D2J5 394 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 GAB1Q13480 694 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 CAPRIN1Q14444 709 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 PTGR1Q14914 329 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 PON2Q15165 354 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RBBP5Q15291 538 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 CYP51A1Q16850 503 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 SYT16Q17RD7 645 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 DUOXA1Q1HG43 343 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 GPAT3Q53EU6 434 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 PYCR3Q53H96 274 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 SPANXN4Q5MJ08 99 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 CPTPQ5TA50 214 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 PXDC1Q5TGL8 231 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 C18orf63Q68DL7 685 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 TMIGD1Q6UXZ0 262 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 NRARPQ7Z6K4 114 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 NOXA1Q86UR1 476 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 IFNEQ86WN2 208 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 SLC30A8Q8IWU4 369 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RIMKLAQ8IXN7 391 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 MICU2Q8IYU8 434 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 CADM3Q8N126 398 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 METTL4Q8N3J2 472 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 ANKFN1Q8N957 763 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 PAPD5Q8NDF8 572 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 OR2T12Q8NG77 320 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 OR2L8Q8NGY9 312 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 C16orf52Q8NHV5 167 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 CANT1Q8WVQ1 401 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 NEIL2Q969S2 332 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 CENPNQ96H22 339 aaPredicted RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 HARBI1Q96MB7 349 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 C12orf66Q96MD2 445 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 ZNF570Q96NI8 536 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 TSSK3Q96PN8 268 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 OR2M4Q96R27 311 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 OR4K3Q96R72 315 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 TAAR6Q96RI8 345 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 SIGLEC11Q96RL6 698 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 HBEGFQ99075 208 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 MTERF1Q99551 399 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 COQ7Q99807 217 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RPP25Q9BUL9 199 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 OSBPL11Q9BXB4 747 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 OSBPL10Q9BXB5 764 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RHBGQ9H310 441 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 MYNNQ9NPC7 610 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 KLHL28Q9NXS3 571 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 ZNF282Q9UDV7 671 aaPredicted RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 BTNL2Q9UIR0 455 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RIMS3Q9UJD0 308 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RNF150Q9ULK6 438 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 MMP17Q9ULZ9 603 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 HTTP42858 3142 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 MYO10Q9HD67 2058 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 TRBV5-3A0A0A0MS03 114 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 TMEM8BA6NDV4 472 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 TMEM247A6NEH6 219 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 OR5K4A6NMS3 321 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 PDZK1P1A8MUH7 402 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 C9JVG2 144 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 PRAMEF26H0Y7S4 382 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 SLC31A1O15431 190 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 FLRT2O43155 660 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ARHGEF9O43307 516 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 AKR7A2O43488 359 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 DENRO43583 198 aaKnown RBP4.65□□□□□ -1.67
SRP54-211ENST00000556445 PCDH7O60245 1069 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ZNF217O75362 1048 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 KRT75O95678 551 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 LDLRP01130 860 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 IFNA14P01570 189 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 IGKV2-30P06310 120 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 F3P13726 295 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 CD1EP15812 388 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ATP6V1B2P21281 511 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 ITGA3P26006 1051 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 HTR2AP28223 471 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 CMPK1P30085 196 aa4.65□□□□□ -1.67
SRP54-211ENST00000556445 SHMT2P34897 504 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms