RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PDCD2Q16342 344 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-219ENST00000556432 MAPK14Q16539 360 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 C3orf36Q3SXR2 165 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 TMEM99Q8N816 258 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 ZIC4Q8N9L1 334 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 CCDC63Q8NA47 563 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 FAM71CQ8NEG0 241 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 PSMA8Q8TAA3 256 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 IFT81Q8WYA0 676 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 BCL2L2Q92843 193 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-219ENST00000556432 SLC35G5Q96KT7 338 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 FMO2Q99518 471 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 SERHL2Q9H4I8 314 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 DDX28Q9NUL7 540 aaKnown RBP12.02□□□□□ -0.49
ACTN1-219ENST00000556432 REV1Q9UBZ9 1251 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 CMAHPQ9Y471 501 aa12.02□□□□□ -0.49
ACTN1-219ENST00000556432 NUP214P35658 2090 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-219ENST00000556432 TMEM129A0AVI4 362 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 G3V2L1 256 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 WNT9BO14905 357 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 PIP5K1BO14986 540 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 SYNGR3O43761 229 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 SCN2BO60939 215 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-219ENST00000556432 GPIP06744 558 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 CAPZA2P47755 286 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 UBA52P62987 128 aaKnown RBP12.01□□□□□ -0.49
ACTN1-219ENST00000556432 CEACAM7Q14002 265 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 OR7A5Q15622 319 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 ARHGAP11BQ3KRB8 267 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 ATP6AP1LQ52LC2 224 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 ELFN2Q5R3F8 820 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 ATAD3BQ5T9A4 648 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 TMEM225Q6GV28 225 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 MYPOPQ86VE0 399 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-219ENST00000556432 CLEC4FQ8N1N0 589 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 LRRC17Q8N6Y2 441 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 RDH5Q92781 318 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 BOD1Q96IK1 185 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 ZNF317Q96PQ6 595 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-219ENST00000556432 PRPF18Q99633 342 aaKnown RBP12.01□□□□□ -0.49
ACTN1-219ENST00000556432 SF3B5Q9BWJ5 86 aaKnown RBP12.01□□□□□ -0.49
ACTN1-219ENST00000556432 ZNF350Q9GZX5 532 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 CRLF2Q9HC73 371 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 ESM1Q9NQ30 184 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 SLC52A3Q9NQ40 469 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 EXD2Q9NVH0 621 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 DCDC2Q9UHG0 476 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 OSGIN1Q9UJX0 560 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 EMCNQ9ULC0 261 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 WDR45Q9Y484 360 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 PPIAL4AQ9Y536 164 aa12.01□□□□□ -0.49
ACTN1-219ENST00000556432 ZC3H12DA2A288 527 aaKnown RBP12□□□□□ -0.49
ACTN1-219ENST00000556432 AP3D1O14617 1153 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 ZNF208O43345 1280 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 IGKV3-15P01624 115 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 IGFBP1P08833 259 aaPredicted RBP12□□□□□ -0.49
ACTN1-219ENST00000556432 ANPEPP15144 967 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 ADRA2CP18825 462 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 ACHEP22303 614 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 TACR3P29371 465 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 CASQ1P31415 396 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 SELENOPP49908 381 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 HPCAP84074 193 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 MYBPC1Q00872 1141 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 PTGR1Q14914 329 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 SLC9B1Q4ZJI4 515 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 NIPAL3Q6P499 406 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 C1orf229Q6ZS94 237 aaPredicted RBP12□□□□□ -0.49
ACTN1-219ENST00000556432 C6orf120Q7Z4R8 191 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 C1QL2Q7Z5L3 287 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 GSPT2Q8IYD1 628 aaKnown RBP12□□□□□ -0.49
ACTN1-219ENST00000556432 KRTCAP2Q8N6L1 136 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 MAGEE2Q8TD90 523 aaPredicted RBP12□□□□□ -0.49
ACTN1-219ENST00000556432 ACMSDQ8TDX5 336 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 XAGE5Q8WWM1 108 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 C22orf15Q8WYQ4 148 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 C1orf50Q9BV19 199 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 OR51I1Q9H343 314 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 TUBB1Q9H4B7 451 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 ZNF275Q9NSD4 429 aaPredicted RBP12□□□□□ -0.49
ACTN1-219ENST00000556432 OXSMQ9NWU1 459 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 ADPRHL2Q9NX46 363 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 GIMAP2Q9UG22 337 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 CORINQ9Y5Q5 1042 aa12□□□□□ -0.49
ACTN1-219ENST00000556432 A0A0G2JMP0 313 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 A0A0X1KG70 313 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 RNF103-CHMP3A0A140T963 221 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 AQP7P3A6NL99 342 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 CLDN24A6NM45 220 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 GLRA3O75311 464 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 AVPP01185 164 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 HPXP02790 462 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 CBR1P16152 277 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 COL8A2P25067 703 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 ALDH3B1P43353 468 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 SH3BGRP55822 239 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-219ENST00000556432 DNAJB13P59910 316 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 HBA1P69905 142 aa11.99□□□□□ -0.49
ACTN1-219ENST00000556432 KCNJ10P78508 379 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms