RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 YY1AP1Q9H869 796 aa1.91□□□□□ -2.1
SCFD1-218ENST00000556256 FOLH1BQ9HBA9 442 aa1.91□□□□□ -2.1
SCFD1-218ENST00000556256 BTNL2Q9UIR0 455 aa1.91□□□□□ -2.1
SCFD1-218ENST00000556256 PTBP2Q9UKA9 531 aaKnown RBP1.91□□□□□ -2.1
SCFD1-218ENST00000556256 TTC21BQ7Z4L5 1316 aa1.91□□□□□ -2.1
SCFD1-218ENST00000556256 HELTA6NFD8 242 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 TRAF3IP2O43734 574 aaPredicted RBP1.9□□□□□ -2.11
SCFD1-218ENST00000556256 NPIPB7O75200 414 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 SURF6O75683 361 aaKnown RBP1.9□□□□□ -2.11
SCFD1-218ENST00000556256 DIRAS1O95057 198 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 DBTP11182 482 aaKnown RBP1.9□□□□□ -2.11
SCFD1-218ENST00000556256 CCNE1P24864 410 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 SHMT2P34897 504 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 RBMXP38159 391 aaKnown RBP1.9□□□□□ -2.11
SCFD1-218ENST00000556256 CSNK1G2P78368 415 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 GPNMBQ14956 572 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 DUSP7Q16829 419 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF630Q2M218 657 aaPredicted RBP1.9□□□□□ -2.11
SCFD1-218ENST00000556256 BCL7AQ4VC05 210 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 OR52E8Q6IFG1 317 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 ZSCAN25Q6NSZ9 544 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 RGS9BPQ6ZS82 235 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 FAM43BQ6ZT52 329 aaPredicted RBP1.9□□□□□ -2.11
SCFD1-218ENST00000556256 DHDDSQ86SQ9 333 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 TRIM69Q86WT6 500 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 CCDC50Q8IVM0 306 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 FTMTQ8N4E7 242 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 LINC01555Q8NAE3 123 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 C20orf203Q8NBC4 194 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF606Q8WXB4 792 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 DCUN1D4Q92564 292 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 ELSPBP1Q96BH3 223 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 KCNA7Q96RP8 456 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 NPY6RQ99463 290 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 RNF2Q99496 336 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 REEP4Q9H6H4 257 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 CYTL1Q9NRR1 136 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 AIG1Q9NVV5 245 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 ADAM28Q9UKQ2 775 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 CDH9Q9ULB4 789 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 STAP1Q9ULZ2 295 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 COPS3Q9UNS2 423 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 RPL36Q9Y3U8 105 aaKnown RBP1.9□□□□□ -2.11
SCFD1-218ENST00000556256 V9GY05 133 aa1.9□□□□□ -2.11
SCFD1-218ENST00000556256 RPAP1Q9BWH6 1393 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-218ENST00000556256 A0A1W2PPE3 182 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 CLRN2A0PK11 232 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 A6NIZ1 184 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 SNTNA6NMZ2 147 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 USP27XA6NNY8 438 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 E9PBE3 544 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 LOC110117498-PIK3R3F6TDL0 507 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 HSD17B6O14756 317 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF208O43345 1280 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 ATP5LO75964 103 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 IL1BP01584 269 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 HSMCR30P0CW71 290 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 NCK1P16333 377 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 HTR1EP28566 365 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 CD1BP29016 333 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 CCR1P32246 355 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 KPNA2P52292 529 aaKnown RBP1.89□□□□□ -2.11
SCFD1-218ENST00000556256 PKNOX1P55347 436 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 DLX1P56177 255 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 RAP1BP61224 184 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 MECOMQ03112 1051 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 FGL1Q08830 312 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 SHHQ15465 462 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 PARP15Q460N3 678 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 FILIP1LQ4L180 1135 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 RNF165Q6ZSG1 346 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 PGAP1Q75T13 922 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 SUMF2Q8NBJ7 301 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 ZNF740Q8NDX6 193 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 OR4K14Q8NGD5 310 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 MAGEE2Q8TD90 523 aaPredicted RBP1.89□□□□□ -2.11
SCFD1-218ENST00000556256 SCFD1Q8WVM8 642 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 MYDGFQ969H8 173 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 RPUSD4Q96CM3 377 aaKnown RBP1.89□□□□□ -2.11
SCFD1-218ENST00000556256 RBKSQ9H477 322 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 NXF3Q9H4D5 531 aaKnown RBP1.89□□□□□ -2.11
SCFD1-218ENST00000556256 MCCC2Q9HCC0 563 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 MMP26Q9NRE1 261 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 TREM2Q9NZC2 230 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 CLEC4AQ9UMR7 237 aa1.89□□□□□ -2.11
SCFD1-218ENST00000556256 ZNFX1Q9P2E3 1918 aaKnown RBP1.89□□□□□ -2.11
SCFD1-218ENST00000556256 CHD4Q14839 1912 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 A0A0G2JLM5 398 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 TCRBV9S1A1TA0A576 114 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 PINLYPA6NC86 204 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 A8MUA0 341 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 ABCD4O14678 606 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 RGS16O15492 202 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 MBTPS2O43462 519 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 TIMM8AO60220 97 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-218ENST00000556256 FAM189A1O60320 539 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 UGT1A9O60656 530 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 FCMRO60667 390 aa1.88□□□□□ -2.11
SCFD1-218ENST00000556256 CLDN9O95484 217 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms