RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 A0A0B4J2E0 115 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 A0A1B0GX12 115 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 AQP7P3A6NL99 342 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 ELOA3DA6NLF2 546 aaPredicted RBP12.08□□□□□ -0.48
SNX6-203ENST00000555416 SLC22A2O15244 555 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 EIF1BO60739 113 aaKnown RBP12.08□□□□□ -0.48
SNX6-203ENST00000555416 LYPD3O95274 346 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 THY1P04216 161 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 GPIP06744 558 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 TNFRSF1BP20333 461 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 LSP1P33241 339 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 RPS5P46782 204 aaKnown RBP12.08□□□□□ -0.48
SNX6-203ENST00000555416 ELOA3BQ3SY89 546 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 ALKBH2Q6NS38 261 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 CCDC80Q76M96 950 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 WFDC8Q8IUA0 241 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 ZNF100Q8IYN0 542 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 KDM8Q8N371 416 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 ELOA3Q8NG57 546 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 OR9K2Q8NGE7 335 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 VANGL1Q8TAA9 524 aaPredicted RBP12.08□□□□□ -0.48
SNX6-203ENST00000555416 STK35Q8TDR2 534 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 TAAR8Q969N4 342 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 SLC25A36Q96CQ1 311 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 ZNF385AQ96PM9 386 aaKnown RBP12.08□□□□□ -0.48
SNX6-203ENST00000555416 ECSITQ9BQ95 431 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 TRIM2Q9C040 744 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 CCM2LQ9NUG4 571 aaPredicted RBP12.08□□□□□ -0.48
SNX6-203ENST00000555416 CMTM6Q9NX76 183 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 ZNF226Q9NYT6 803 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 EMC3Q9P0I2 261 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 RPS6KB2Q9UBS0 482 aa12.08□□□□□ -0.48
SNX6-203ENST00000555416 TESQ9UGI8 421 aaKnown RBP12.08□□□□□ -0.48
SNX6-203ENST00000555416 HIVEP1P15822 2718 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.07□□□□□ -0.48
SNX6-203ENST00000555416 AIM2O14862 343 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 SNX3O60493 162 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 AHSA1O95433 338 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 PLAUP00749 431 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 NPPAP01160 153 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 CBLP22681 906 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 CDH12P55289 794 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 LTBQ06643 244 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 LGALS3BPQ08380 585 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 ITGADQ13349 1161 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 TAB1Q15750 504 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 ALG10BQ5I7T1 473 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 WDR88Q6ZMY6 472 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 PATL1Q86TB9 770 aaKnown RBP12.07□□□□□ -0.48
SNX6-203ENST00000555416 RP9Q8TA86 221 aaKnown RBP12.07□□□□□ -0.48
SNX6-203ENST00000555416 KISS1RQ969F8 398 aaPredicted RBP12.07□□□□□ -0.48
SNX6-203ENST00000555416 SLC38A4Q969I6 547 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 MCHR1Q99705 422 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 NAA11Q9BSU3 229 aaPredicted RBP12.07□□□□□ -0.48
SNX6-203ENST00000555416 MRGBPQ9NV56 204 aa12.07□□□□□ -0.48
SNX6-203ENST00000555416 PRRC2AP48634 2157 aaKnown RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 A0A087WUJ7 227 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 CPSF4LA6NMK7 179 aaKnown RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 LRRN3E7EW58 273 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 GPR171O14626 319 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 CCDC22O60826 627 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 SHOX2O60902 331 aaPredicted RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 FZD7O75084 574 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 MRPL33O75394 65 aaKnown RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 GOSR1O95249 250 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 ATE1O95260 518 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 C8BP07358 591 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 ITGA5P08648 1049 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 PNMTP11086 282 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 PPP3CBP16298 524 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 COX5AP20674 150 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 IL32P24001 234 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 GNGT1P63211 74 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 P2RY6Q15077 328 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 TSPO2Q5TGU0 170 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 FBXW9Q5XUX1 488 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 C8orf82Q6P1X6 216 aaPredicted RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 ULK3Q6PHR2 472 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 PAMR1Q6UXH9 720 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 CASP12Q6UXS9 341 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 BHLHA15Q7RTS1 189 aaPredicted RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 GPAT4Q86UL3 456 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 EPHX4Q8IUS5 362 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 SLC30A8Q8IWU4 369 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 SLC15A3Q8IY34 581 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 ZNF433Q8N7K0 673 aaPredicted RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 PCYOX1LQ8NBM8 494 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 BHLHE22Q8NFJ8 381 aaPredicted RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 STEAP2Q8NFT2 490 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 MFSD8Q8NHS3 518 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 RNF217Q8TC41 542 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 DNAJA4Q8WW22 397 aaPredicted RBP12.06□□□□□ -0.48
SNX6-203ENST00000555416 APH1AQ96BI3 265 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 SH3GL1Q99961 368 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 TAPBPLQ9BX59 468 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 C12orf10Q9HB07 376 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 SLC7A10Q9NS82 523 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 B3GAT1Q9P2W7 334 aa12.06□□□□□ -0.48
SNX6-203ENST00000555416 SLC13A4Q9UKG4 626 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms