RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 MTORP42345 2549 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 NF1P21359 2839 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 CIB4A0PJX0 185 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 DPRXA6NFQ7 191 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 OVOL3O00110 214 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 FRS3O43559 492 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 OR2T1O43869 369 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 RAMP1O60894 148 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 SERPINB7O75635 380 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 PLAUP00749 431 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 PNMTP11086 282 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 PRG2P13727 222 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 SLC6A2P23975 617 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 PTH2RP49190 550 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 BSPH1Q075Z2 132 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 CAPRIN1Q14444 709 aaKnown RBP10.43□□□□□ -0.74
VRK1-204ENST00000555351 TSC22D1Q15714 1073 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 GABRA6Q16445 453 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 RUNDC3AQ59EK9 446 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 FAM91A1Q658Y4 838 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 KLHL17Q6TDP4 642 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 TMEM108Q6UXF1 575 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 SLC30A8Q8IWU4 369 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 TMEM99Q8N816 258 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 ZIC4Q8N9L1 334 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 HIPK4Q8NE63 616 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 OR9K2Q8NGE7 335 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 OR6S1Q8NH40 331 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 LILRB1Q8NHL6 650 aaPredicted RBP10.43□□□□□ -0.74
VRK1-204ENST00000555351 DNAJA4Q8WW22 397 aaPredicted RBP10.43□□□□□ -0.74
VRK1-204ENST00000555351 ZNF317Q96PQ6 595 aaPredicted RBP10.43□□□□□ -0.74
VRK1-204ENST00000555351 CPPED1Q9BRF8 314 aaPredicted RBP10.43□□□□□ -0.74
VRK1-204ENST00000555351 NDUFAF1Q9Y375 327 aa10.43□□□□□ -0.74
VRK1-204ENST00000555351 MAGED1Q9Y5V3 778 aaPredicted RBP10.43□□□□□ -0.74
VRK1-204ENST00000555351 LOC102725191A0A1B0GVB3 256 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 CCT8L1PA6NM43 557 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 FTCDNL1E5RQL4 147 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 AKR7A3O95154 331 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 AHSA1O95433 338 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 INHBBP09529 407 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 DANCRP0C864 163 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 PTAFRP25105 342 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 MPGP29372 298 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 ADSLP30566 484 aaPredicted RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 P2RY4P51582 365 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 RPS4XP62701 263 aaKnown RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 FAPQ12884 760 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 SCARB2Q14108 478 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 MFSD13AQ14CX5 517 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 OR7A5Q15622 319 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 STK11Q15831 433 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 ADRM1Q16186 407 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 TMEM225Q6GV28 225 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 ULK3Q6PHR2 472 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 CASP12Q6UXS9 341 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 NET1Q7Z628 596 aaPredicted RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 YTHDF3Q7Z739 585 aaKnown RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 C11orf65Q8NCR3 313 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 NFKBIDQ8NI38 313 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 GTPBP3Q969Y2 492 aaKnown RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 TRMT61AQ96FX7 289 aaKnown RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 COX4I2Q96KJ9 171 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 ANKRD27Q96NW4 1050 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 SLCO5A1Q9H2Y9 848 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 MOV10Q9HCE1 1003 aaKnown RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 OBP2BQ9NPH6 170 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 FAIMQ9NVQ4 179 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 UPB1Q9UBR1 384 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 RPS6KB2Q9UBS0 482 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 TESQ9UGI8 421 aaKnown RBP10.42□□□□□ -0.74
VRK1-204ENST00000555351 AMDHD2Q9Y303 409 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 SLC25A15Q9Y619 301 aa10.42□□□□□ -0.74
VRK1-204ENST00000555351 SETD2Q9BYW2 2564 aaPredicted RBP10.41□□□□□ -0.74
VRK1-204ENST00000555351 ELOA3DA6NLF2 546 aaPredicted RBP10.41□□□□□ -0.74
VRK1-204ENST00000555351 ANGPT2O15123 496 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 FMO6PO60774 539 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 RAD51DO75771 328 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 NPPAP01160 153 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 C8BP07358 591 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 ITGA5P08648 1049 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 PCBP3P57721 371 aaKnown RBP10.41□□□□□ -0.74
VRK1-204ENST00000555351 EGR4Q05215 589 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 ELOA3BQ3SY89 546 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 FAM69AQ5T7M9 428 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 TSPO2Q5TGU0 170 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 CREB3L2Q70SY1 520 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 AAED1Q7RTV5 226 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 DTX2Q86UW9 622 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 C10orf111Q8N326 155 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 ADPRHL1Q8NDY3 354 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 ELOA3Q8NG57 546 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 SMAP2Q8WU79 429 aaPredicted RBP10.41□□□□□ -0.74
VRK1-204ENST00000555351 SLC38A4Q969I6 547 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 SLC47A1Q96FL8 570 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 PERPQ96FX8 193 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 CGREF1Q99674 301 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 LINC00470Q9BZP3 86 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms