RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 IGHMP01871 453 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 CLUP10909 449 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 HIST1H1CP16403 213 aaKnown RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 PRKCAP17252 672 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 NRG3P56975 720 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 Q0VFX4 171 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 CHAF1BQ13112 559 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ITGADQ13349 1161 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 SPHARQ15513 63 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 TSTQ16762 297 aaKnown RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 H3F3CQ6NXT2 135 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ARHGAP11AQ6P4F7 1023 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 PPP1R32Q7Z5V6 425 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 FADS6Q8N9I5 356 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 OR4F15Q8NGB8 312 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 OR5L2Q8NGL0 311 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 RFKQ969G6 155 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ZPBPQ9BS86 351 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 OR51E2Q9H255 320 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ERVK13-1Q9NX77 482 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 KLHL21Q9UJP4 597 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 FBXL4Q9UKA2 621 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ASCC3Q8N3C0 2202 aaKnown RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 ELOA3DA6NLF2 546 aaPredicted RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 GTPBP1O00178 669 aaKnown RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 WWP2O00308 870 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 HCRTR2O43614 444 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 ZFAND5O76080 213 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 STK17BO94768 372 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 APEHP13798 732 aaKnown RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 SOX3P41225 446 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 WNT4P56705 351 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 COPZ1P61923 177 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 CRMP1Q14194 572 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 QPRTQ15274 297 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 COL28A1Q2UY09 1125 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 ELOA3BQ3SY89 546 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 FCRLBQ6BAA4 426 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 SIGIRRQ6IA17 410 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 CD200R1LQ6Q8B3 271 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 LINC00299Q6ZSB3 139 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 SHFQ7M4L6 423 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 ELOA3Q8NG57 546 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 OR11G2Q8NGC1 345 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 OR6S1Q8NH40 331 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 POC1BQ8TC44 478 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 MED30Q96HR3 178 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 TAAR9Q96RI9 348 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 CMKLR1Q99788 373 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 IFT27Q9BW83 186 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 RNF167Q9H6Y7 350 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 FKRPQ9H9S5 495 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 ZBTB20Q9HC78 741 aaPredicted RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 CPNE5Q9HCH3 593 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 TAS2R5Q9NYW4 299 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 C4orf47A7E2U8 309 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 NOTOA8MTQ0 251 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 CCRL2O00421 344 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 SCO2O43819 266 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 IDH3BO43837 385 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 OR2J2O76002 312 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 HPGDP15428 266 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 BMP7P18075 431 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 PGCP20142 388 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 POLR2HP52434 150 aaKnown RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 GXYLT1Q4G148 440 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 SOWAHCQ53LP3 525 aaPredicted RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 DCAF12Q5T6F0 453 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 BICRALQ6AI39 1079 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 PHC2Q8IXK0 858 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 OR52N1Q8NH53 320 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 CHPT1Q8WUD6 406 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 MR1Q95460 341 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 SH3YL1Q96HL8 342 aaPredicted RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 TEAD3Q99594 435 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 EDEM2Q9BV94 578 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 TBL1XR1Q9BZK7 514 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 GALNT9Q9HCQ5 603 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 FOXJ2Q9P0K8 574 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 CRNNQ9UBG3 495 aaPredicted RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 ZMAT5Q9UDW3 170 aaKnown RBP8.07□□□□□ -1.12
TDP1-210ENST00000554976 ADAM18Q9Y3Q7 739 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 PCDHGA1Q9Y5H4 931 aa8.07□□□□□ -1.12
TDP1-210ENST00000554976 EFNA2O43921 213 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 CLPXO76031 633 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 APOL3O95236 402 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 KLK3P07288 261 aaPredicted RBP8.06□□□□□ -1.12
TDP1-210ENST00000554976 HK1P19367 917 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 IDUAP35475 653 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 PRPS1P60891 318 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 E2F1Q01094 437 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 ZNF85Q03923 595 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.06□□□□□ -1.12
TDP1-210ENST00000554976 TCF15Q12870 199 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 TPBGQ13641 420 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 EXT1Q16394 746 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 SLC35F1Q5T1Q4 408 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 LINC01590Q5TEZ4 76 aa8.06□□□□□ -1.12
TDP1-210ENST00000554976 OR2G6Q5TZ20 316 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms