RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 FREM1Q5H8C1 2179 aa10.87□□□□□ -0.67
CCDC85C-202ENST00000554877 CDHR4A6H8M9 788 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 ZNF716A6NP11 495 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 M0R1B8 84 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 ABCD4O14678 606 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 SLC22A2O15244 555 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 KRT33AO76009 404 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 SOD3P08294 240 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 PPIBP23284 216 aaKnown RBP10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 FKBP2P26885 142 aaKnown RBP10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 PCSK6P29122 969 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 LSP1P33241 339 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 IDUAP35475 653 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 CLK1P49759 484 aaKnown RBP10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 PCBP3P57721 371 aaKnown RBP10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 ZNF672Q499Z4 452 aaPredicted RBP10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 ZNF311Q5JNZ3 666 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 RNF220Q5VTB9 566 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 TMEM225Q6GV28 225 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 ABLIM2Q6H8Q1 611 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 DHDDSQ86SQ9 333 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 ZNF440Q8IYI8 595 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 MAPK1IP1LQ8NDC0 245 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 SLC25A36Q96CQ1 311 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 TRMT61AQ96FX7 289 aaKnown RBP10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 TMEM204Q9BSN7 226 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 TAPBPLQ9BX59 468 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 GSX2Q9BZM3 304 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 ARMC7Q9H6L4 198 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 KAT8Q9H7Z6 458 aaKnown RBP10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 CISD1Q9NZ45 108 aaKnown RBP10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 TRAPPC4Q9Y296 219 aa10.86□□□□□ -0.67
CCDC85C-202ENST00000554877 USF3Q68DE3 2245 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 A0A0G2JPF8 293 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 HNRNPCL2B2RXH8 293 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 HNRNPCL3B7ZW38 293 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 ZNF208O43345 1280 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 SNX3O60493 162 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 EIF1BO60739 113 aaKnown RBP10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 HNRNPCL1O60812 293 aaKnown RBP10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 PGM3O95394 542 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 GPIP06744 558 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 THBS1P07996 1170 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 HNRNPCL4P0DMR1 293 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 ACAA2P42765 397 aaKnown RBP10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 CRYBA2P53672 197 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 CDH11P55287 796 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 IL1RL1Q01638 556 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 VEZF1Q14119 521 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 PDK3Q15120 406 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 TIMM23BQ5SRD1 257 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 WBP2NLQ6ICG8 309 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 C8orf82Q6P1X6 216 aaPredicted RBP10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 SLC22A25Q6T423 547 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 PRSS57Q6UWY2 283 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 AAED1Q7RTV5 226 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 SERPINA11Q86U17 422 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 CALHM3Q86XJ0 350 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 TREML1Q86YW5 311 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 RADILQ96JH8 1075 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 USB1Q9BQ65 265 aaKnown RBP10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 ADAM19Q9H013 955 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 RAD21L1Q9H4I0 556 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 ALG2Q9H553 416 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 PARPBPQ9NWS1 579 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 NPAP1Q9NZP6 1156 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 RPS6KB2Q9UBS0 482 aa10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 MAGED1Q9Y5V3 778 aaPredicted RBP10.85□□□□□ -0.67
CCDC85C-202ENST00000554877 FLNAP21333 2647 aaKnown RBP10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 IGKV3D-15A0A087WSY6 115 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 OR5H1A6NKK0 313 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 ETS2P15036 469 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 CBLP22681 906 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 TNK1Q13470 666 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 CLEC12BQ2HXU8 276 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 TRMT5Q32P41 509 aaKnown RBP10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 TSPO2Q5TGU0 170 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 REP15Q6BDI9 236 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 KLHL17Q6TDP4 642 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 SPATA21Q7Z572 469 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 PIGWQ7Z7B1 504 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 KDM8Q8N371 416 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 NFKBIDQ8NI38 313 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 BBS10Q8TAM1 723 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 HTRA1Q92743 480 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 SLC35B4Q969S0 331 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 PRR14Q9BWN1 585 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 SPATA9Q9BWV2 254 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 SLC7A10Q9NS82 523 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 MRGBPQ9NV56 204 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 ARMCX1Q9P291 453 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 IFT52Q9Y366 437 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 FLVCR1Q9Y5Y0 555 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 ATP23Q9Y6H3 246 aa10.84□□□□□ -0.67
CCDC85C-202ENST00000554877 LIPT2A6NK58 231 aa10.83□□□□□ -0.68
CCDC85C-202ENST00000554877 ELOA3DA6NLF2 546 aaPredicted RBP10.83□□□□□ -0.68
CCDC85C-202ENST00000554877 BBIP1A8MTZ0 92 aa10.83□□□□□ -0.68
CCDC85C-202ENST00000554877 A8MVM7 634 aa10.83□□□□□ -0.68
CCDC85C-202ENST00000554877 FAM171A2A8MVW0 826 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms