RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ALOX5P09917 674 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 NUDT7P0C024 238 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 TFPTP0C1Z6 253 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 PPP3CBP16298 524 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 PSMB1P20618 241 aaKnown RBP9.4□□□□□ -0.9
SHMT2-215ENST00000554656 SFTPDP35247 375 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 ZNF41P51814 821 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-215ENST00000554656 LASP1Q14847 261 aaKnown RBP9.4□□□□□ -0.9
SHMT2-215ENST00000554656 TOMM34Q15785 309 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-215ENST00000554656 CDC73Q6P1J9 531 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 CBLN3Q6UW01 205 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 TFAP2EQ6VUC0 442 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 PIWIL3Q7Z3Z3 882 aaKnown RBP9.4□□□□□ -0.9
SHMT2-215ENST00000554656 NUFIP2Q7Z417 695 aaKnown RBP9.4□□□□□ -0.9
SHMT2-215ENST00000554656 GABRG1Q8N1C3 465 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 CLEC4FQ8N1N0 589 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 COX18Q8N8Q8 333 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 B4GALNT2Q8NHY0 566 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 BBS10Q8TAM1 723 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 LZICQ8WZA0 190 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 PMM1Q92871 262 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 OSTF1Q92882 214 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 KLHL15Q96M94 604 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 ZNF607Q96SK3 696 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 MDFIQ99750 246 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 CHID1Q9BWS9 393 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 BTBD2Q9BX70 525 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 COQ10BQ9H8M1 238 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 BCL2L10Q9HD36 194 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 PAQR5Q9NXK6 330 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-215ENST00000554656 PLCE1Q9P212 2302 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 ATRQ13535 2644 aa9.4□□□□□ -0.9
SHMT2-215ENST00000554656 FBN3Q75N90 2809 aa9.4□□□□□ -0.91
SHMT2-215ENST00000554656 ABCA1O95477 2261 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 NPIPB9F8W1W9 429 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 SCDO00767 359 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 CLOCKO15516 846 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 TIPRLO75663 272 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 PRKD3O94806 890 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 AK1P00568 194 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 C1QCP02747 245 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 SEMG1P04279 462 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 GUSBP08236 651 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 ETS2P15036 469 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 EDNRAP25101 427 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 ELK4P28324 431 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 LCN1P31025 176 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 HSPA13P48723 471 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 CRISP3P54108 245 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 NR1H2P55055 460 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 SELENOWP63302 87 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 POU6F2P78424 691 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-215ENST00000554656 GK3PQ14409 553 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 LRRC23Q53EV4 343 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-215ENST00000554656 KLHL26Q53HC5 615 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 CYBRD1Q53TN4 286 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 ATAD3BQ5T9A4 648 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 AP1ARQ63HQ0 302 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 BEND4Q6ZU67 534 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 KRT73Q86Y46 540 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 MISPQ8IVT2 679 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF611Q8N823 705 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 NFKBIDQ8NI38 313 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 LRTOMTQ8WZ04 291 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 NEUROG1Q92886 237 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 S100PBPQ96BU1 408 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 STACQ99469 402 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 SEPHS2Q99611 448 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF184Q99676 751 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-215ENST00000554656 C9orf16Q9BUW7 83 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 SPATA5L1Q9BVQ7 753 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 OSBPL10Q9BXB5 764 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 OR10A4Q9H209 315 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 OR51I1Q9H343 314 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 PIGUQ9H490 435 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 SERHL2Q9H4I8 314 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 IL1RAPQ9NPH3 570 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 DUSP22Q9NRW4 184 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 GLRX2Q9NS18 164 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 EXD2Q9NVH0 621 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 DNAJB9Q9UBS3 223 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 ING1Q9UK53 422 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-215ENST00000554656 BAG5Q9UL15 447 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 ICAM5Q9UMF0 924 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 CARD8Q9Y2G2 431 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 GPR52Q9Y2T5 361 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 DTNAQ9Y4J8 743 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 COL6A5A8TX70 2615 aa9.39□□□□□ -0.91
SHMT2-215ENST00000554656 A0A0G2JPF8 293 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 CENPVL1A0A0U1RR11 272 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 HNRNPCL2B2RXH8 293 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 HNRNPCL3B7ZW38 293 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 OVOL3O00110 214 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 SERPINB7O75635 380 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 PGM3O95394 542 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF682O95780 498 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 SOD3P08294 240 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 HNRNPCL4P0DMR1 293 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 OR12D1P0DN82 309 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms