RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 NANOGP8Q6NSW7 305 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 PAQR6Q6TCH4 344 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 ATG4DQ86TL0 474 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-213ENST00000554600 COMTD1Q86VU5 262 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 RANBP3LQ86VV4 465 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-213ENST00000554600 SLC30A8Q8IWU4 369 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 PCYOX1LQ8NBM8 494 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 PLPPR2Q96GM1 343 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 HS3ST6Q96QI5 342 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 SH3GL1Q99961 368 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 FAM107BQ9H098 131 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 KAT8Q9H7Z6 458 aaKnown RBP9.44□□□□□ -0.9
SHMT2-213ENST00000554600 PLEKHF2Q9H8W4 249 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 NANOGQ9H9S0 305 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 NGBQ9NPG2 151 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 PARPBPQ9NWS1 579 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 ARMCX1Q9P291 453 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 UPB1Q9UBR1 384 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 SLC9A8Q9Y2E8 581 aa9.44□□□□□ -0.9
SHMT2-213ENST00000554600 DNHD1Q96M86 4753 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 BBIP1A8MTZ0 92 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 TMEM229AB2RXF0 380 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 M0R3H8 397 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 DYNC1I1O14576 645 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 RAD51DO75771 328 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 MFN2O95140 757 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 PNMTP11086 282 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 PTNP21246 168 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 IGHV1-2P23083 117 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 HTR2AP28223 471 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 PCGF2P35227 344 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 H3F3AP84243 136 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 FAPQ12884 760 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 TAB1Q15750 504 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 ALG10BQ5I7T1 473 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 C9orf135Q5VTT2 229 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 FBXW9Q5XUX1 488 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 ULK3Q6PHR2 472 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 PATL1Q86TB9 770 aaKnown RBP9.43□□□□□ -0.9
SHMT2-213ENST00000554600 P3H2Q8IVL5 708 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 C10orf53Q8N6V4 93 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 POU5F2Q8N7G0 328 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 OR9K2Q8NGE7 335 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 VANGL1Q8TAA9 524 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-213ENST00000554600 STK35Q8TDR2 534 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 C10orf82Q8WW14 230 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 DNAJA4Q8WW22 397 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-213ENST00000554600 HSD17B8Q92506 261 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 SLC38A4Q969I6 547 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 LRRC58Q96CX6 371 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 MUCL1Q96DR8 90 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 SLC47A1Q96FL8 570 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 RSPO3Q9BXY4 272 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-213ENST00000554600 OR10A4Q9H209 315 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 GID8Q9NWU2 228 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 ASB6Q9NWX5 421 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 TESQ9UGI8 421 aaKnown RBP9.43□□□□□ -0.9
SHMT2-213ENST00000554600 FLVCR1Q9Y5Y0 555 aa9.43□□□□□ -0.9
SHMT2-213ENST00000554600 AQP7P3A6NL99 342 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 CLOCKO15516 846 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 KLF4O43474 513 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 KRT33AO76009 404 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 ATE1O95260 518 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 GGT1P19440 569 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 CBLP22681 906 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 NR1H2P55055 460 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 PCBP3P57721 371 aaKnown RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 SLC17A1Q14916 467 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 PPA1Q15181 289 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 OR1Q1Q15612 314 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 VMACQ2NL98 169 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 COQ5Q5HYK3 327 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 AAED1Q7RTV5 226 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 NET1Q7Z628 596 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 ZNF433Q8N7K0 673 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 OR8J3Q8NGG0 315 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 MFSD8Q8NHS3 518 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 RCN3Q96D15 328 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 KTI12Q96EK9 354 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 ZNF317Q96PQ6 595 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 MCHR1Q99705 422 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 FOXC2Q99958 501 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 ELAC2Q9BQ52 826 aaKnown RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 USB1Q9BQ65 265 aaKnown RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 SF3B5Q9BWJ5 86 aaKnown RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 ESRP2Q9H6T0 727 aaKnown RBP9.42□□□□□ -0.9
SHMT2-213ENST00000554600 C12orf10Q9HB07 376 aa9.42□□□□□ -0.9
SHMT2-213ENST00000554600 TRAV36DV7A0A075B6V5 113 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 CPSF4LA6NMK7 179 aaKnown RBP9.41□□□□□ -0.9
SHMT2-213ENST00000554600 FXYD1O00168 92 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 AIM2O14862 343 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 SLC22A2O15244 555 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 OR2T1O43869 369 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 CCDC22O60826 627 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 VAMP5O95183 116 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 CNOT4O95628 575 aaKnown RBP9.41□□□□□ -0.9
SHMT2-213ENST00000554600 LGI1O95970 557 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 PLAUP00749 431 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 NPPAP01160 153 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 CD3EP07766 207 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms