RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 QPCTLQ9NXS2 382 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 PTTG3PQ9NZH4 202 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 STX18Q9P2W9 335 aaKnown RBP3.75□□□□□ -1.81
SCFD1-211ENST00000554437 SLC7A8Q9UHI5 535 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 STAP1Q9ULZ2 295 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 NPIPA1Q9UND3 350 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 POLDIP2Q9Y2S7 368 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 TIMM10BQ9Y5J6 103 aa3.75□□□□□ -1.81
SCFD1-211ENST00000554437 A0A0J9YVX5 310 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 FRG2CA6NGY1 282 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 CASKO14936 926 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 RS1O15537 224 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 NIPSNAP2O75323 286 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 B3GAT3O94766 335 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 LRATO95237 230 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 IGF1P05019 195 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 KRTAP1-4P0C5Y4 121 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 PRPS2P11908 318 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 PGAM2P15259 253 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 CD80P33681 288 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 UGT1A5P35504 534 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 CCNG1P51959 295 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 ACLYP53396 1101 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 RAG2P55895 527 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 PAX5Q02548 391 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 ILKQ13418 452 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 GK3PQ14409 553 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 GPR176Q14439 515 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 ATXN7L3Q14CW9 347 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-211ENST00000554437 USF2Q15853 346 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-211ENST00000554437 GSG1Q2KHT4 349 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 BEX5Q5H9J7 111 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 FHL5Q5TD97 284 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 SLX4IPQ5VYV7 408 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 SLC8B1Q6J4K2 584 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 LEG1Q6P5S2 330 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 TTC23LQ6PF05 361 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 PAMR1Q6UXH9 720 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 PRSS48Q7RTY5 328 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 OR5T3Q8NGG3 340 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 MARCH1Q8TCQ1 289 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 DTX3LQ8TDB6 740 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 ADIPOR1Q96A54 375 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 CERS2Q96G23 380 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 SIGLEC12Q96PQ1 595 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 MTMR9Q96QG7 549 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 IL4I1Q96RQ9 567 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 SLC30A2Q9BRI3 323 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 ILKAPQ9H0C8 392 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-211ENST00000554437 SLC25A51Q9H1U9 297 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 ALG9Q9H6U8 611 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 GPN2Q9H9Y4 310 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-211ENST00000554437 LYRM4Q9HD34 91 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 PXMP2Q9NR77 195 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 BARX2Q9UMQ3 279 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-211ENST00000554437 PRPF19Q9UMS4 504 aaKnown RBP3.74□□□□□ -1.81
SCFD1-211ENST00000554437 RASD1Q9Y272 281 aa3.74□□□□□ -1.81
SCFD1-211ENST00000554437 BRD4O60885 1362 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-211ENST00000554437 MYO3BQ8WXR4 1341 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 LRP5LA4QPB2 252 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 FAM74A7A6NL05 159 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 IQCF5A8MTL0 148 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 DLGAP1O14490 977 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 HAT1O14929 419 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 TYROBPO43914 113 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 STX11O75558 287 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 ECDO95905 644 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-211ENST00000554437 ALOX5P09917 674 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 PVRP15151 417 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 PGCP20142 388 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 FASP25445 335 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 CDH5P33151 784 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-211ENST00000554437 NOVA1P51513 510 aaKnown RBP3.73□□□□□ -1.81
SCFD1-211ENST00000554437 SLC25A1P53007 311 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 CTAG1AP78358 180 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 IRF8Q02556 426 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 C1orf61Q13536 156 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 GLYR1Q49A26 553 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-211ENST00000554437 FAM74A3Q4VXF1 159 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 PRR30Q53SZ7 412 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-211ENST00000554437 CGB2Q6NT52 195 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 ATRAIDQ6UW56 229 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 HSDL2Q6YN16 418 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 LANCL3Q6ZV70 420 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 SDR9C7Q8NEX9 313 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 PROKR2Q8NFJ6 384 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 OR1L6Q8NGR2 347 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 OR13C9Q8NGT0 318 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 MAIP1Q8WWC4 291 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 ARNTL2Q8WYA1 636 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 C18orf25Q96B23 403 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-211ENST00000554437 ZNF578Q96N58 590 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-211ENST00000554437 CYTH2Q99418 400 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 APOOQ9BUR5 198 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 GAL3ST2Q9H3Q3 398 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 NT5MQ9NPB1 228 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 CCNB1IP1Q9NPC3 277 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 SLC17A5Q9NRA2 495 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 CTSFQ9UBX1 484 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms