RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 TNFRSF10DQ9UBN6 386 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 PPIEQ9UNP9 301 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF337Q9Y3M9 751 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 SNTNA6NMZ2 147 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 FAM171A2A8MVW0 826 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 MAGEB4O15481 346 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 PNMTP11086 282 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 LIMK1P53667 647 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 WNT4P56705 351 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 C19orf48Q6RUI8 117 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 JAZF1Q86VZ6 243 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 NUBPLQ8TB37 319 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 GPR119Q8TDV5 335 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 HGDQ93099 445 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 TP53INP1Q96A56 240 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 ZMYND19Q96E35 227 aaPredicted RBP11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 Q96M85 177 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 TEAD3Q99594 435 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 SLIRPQ9GZT3 109 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 CCDC86Q9H6F5 360 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 ERVK13-1Q9NX77 482 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 MYOTQ9UBF9 498 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 PISDQ9UG56 409 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 VDAC3Q9Y277 283 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 EXOGQ9Y2C4 368 aaKnown RBP11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 HS3ST3B1Q9Y662 390 aa11.58□□□□□ -0.56
VIPAS39-206ENST00000553888 PCSK5Q92824 1860 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 C12orf71A8MTZ7 269 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 H7C1C5 153 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF883P0CG24 379 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 HK1P19367 917 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 SLC2A5P22732 501 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 SERPINB10P48595 397 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 TGM4P49221 684 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 LCN6P62502 163 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 RPS4XP62701 263 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 RPS25P62851 125 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 SPEM2Q0P670 501 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 INSL4Q14641 139 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 ARSKQ6UWY0 536 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 ADCK1Q86TW2 530 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 NAXDQ8IW45 347 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 ESX1Q8N693 406 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 SPRYD4Q8WW59 207 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 SLC25A36Q96CQ1 311 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 CMKLR1Q99788 373 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 TM9SF2Q99805 663 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 CACNA1CQ13936 2221 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 TEX13CA0A0J9YWL9 993 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 TMEM72A0PK05 275 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 SMIM30A4D0T7 59 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 STK17BO94768 372 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF3P17036 446 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 CXCR1P25024 350 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 P2RX1P51575 399 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 FOXK1P85037 733 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 INSM1Q01101 510 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 DYNC1I2Q13409 638 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 LYPD8Q6UX82 237 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 TIPARPQ7Z3E1 657 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 ZNF485Q8NCK3 441 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 OR10H4Q8NGA5 316 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 TSSK2Q96PF2 358 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 DCLRE1CQ96SD1 692 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 TIMP4Q99727 224 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 DOCK10Q96BY6 2186 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
VIPAS39-206ENST00000553888 OR6C68A6NDL8 312 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 J3QRE1 110 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 GP1BBP13224 206 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 IL11P20809 199 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 CRYBB2P43320 205 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 MLLT11Q13015 90 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 C1DQ13901 141 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 CBFBQ13951 182 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 RNLSQ5VYX0 342 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 SSX6Q7RTT6 188 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 ADGRG3Q86Y34 549 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 SNX29P2Q8IUI4 249 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 GID4Q8IVV7 300 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 ATP6V1C2Q8NEY4 427 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 BCL7BQ9BQE9 202 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 TMEM43Q9BTV4 400 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 ASB6Q9NWX5 421 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 PCDHGA5Q9Y5G8 931 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 IGHV1-45A0A0A0MS14 117 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 TMED7-TICAM2A0A0A6YYA0 188 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 C11orf98E9PRG8 122 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 DVL2O14641 736 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 SUSD5O60279 629 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 EIF4E2O60573 245 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 ZFAND5O76080 213 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 IGHA1P01876 353 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 ASAH2BP0C7U1 165 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 COX6A1P12074 109 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 PGCP20142 388 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 PAICSP22234 425 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 SLC6A8P48029 635 aa11.56□□□□□ -0.56
VIPAS39-206ENST00000553888 RPL18Q07020 188 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms