RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ULK3Q6PHR2 472 aa18.04■□□□□ 0.48
FOXA1-203ENST00000553751 Q6ZT83 130 aa18.04■□□□□ 0.48
FOXA1-203ENST00000553751 TMEM99Q8N816 258 aa18.04■□□□□ 0.48
FOXA1-203ENST00000553751 KTI12Q96EK9 354 aaPredicted RBP18.04■□□□□ 0.48
FOXA1-203ENST00000553751 ZC3HAV1LQ96H79 300 aaKnown RBP18.04■□□□□ 0.48
FOXA1-203ENST00000553751 TAPBPLQ9BX59 468 aa18.04■□□□□ 0.48
FOXA1-203ENST00000553751 OR10A4Q9H209 315 aa18.04■□□□□ 0.48
FOXA1-203ENST00000553751 ADPRHL2Q9NX46 363 aa18.04■□□□□ 0.48
FOXA1-203ENST00000553751 C6orf203Q9P0P8 240 aaPredicted RBP18.04■□□□□ 0.48
FOXA1-203ENST00000553751 NOSIPQ9Y314 301 aaKnown RBP18.04■□□□□ 0.48
FOXA1-203ENST00000553751 FLVCR1Q9Y5Y0 555 aa18.04■□□□□ 0.48
FOXA1-203ENST00000553751 A0A1W2PPR1 153 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 CCT8L1PA6NM43 557 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 FAM220BPB1ANY3 271 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 AIM2O14862 343 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 FMO6PO60774 539 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 FZD7O75084 574 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 AHSA1O95433 338 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 ADAP00813 363 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 PNMTP11086 282 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 P2RY6Q15077 328 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 TSC22D1Q15714 1073 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 SFRP5Q5T4F7 317 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 FBXW10Q5XX13 1052 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 CPLX4Q7Z7G2 160 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 ZNF100Q8IYN0 542 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 OR4D11Q8NGI4 311 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 OR6T1Q8NGN1 323 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 MFSD8Q8NHS3 518 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 SLC38A4Q969I6 547 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 APH1AQ96BI3 265 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 S100PBPQ96BU1 408 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 TMEM27Q9HBJ8 222 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 CMTM6Q9NX76 183 aa18.03■□□□□ 0.48
FOXA1-203ENST00000553751 CNOT4O95628 575 aaKnown RBP18.02■□□□□ 0.48
FOXA1-203ENST00000553751 DNAJA1P31689 397 aaKnown RBP18.02■□□□□ 0.48
FOXA1-203ENST00000553751 RPS5P46782 204 aaKnown RBP18.02■□□□□ 0.48
FOXA1-203ENST00000553751 ITGADQ13349 1161 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 SWT1Q5T5J6 900 aaKnown RBP18.02■□□□□ 0.48
FOXA1-203ENST00000553751 C8orf82Q6P1X6 216 aaPredicted RBP18.02■□□□□ 0.48
FOXA1-203ENST00000553751 ARPINQ7Z6K5 226 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 RBM45Q8IUH3 476 aaKnown RBP18.02■□□□□ 0.48
FOXA1-203ENST00000553751 STEAP2Q8NFT2 490 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 OR2T12Q8NG77 320 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 SLC26A7Q8TE54 656 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 RASSF5Q8WWW0 418 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 SLC47A1Q96FL8 570 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 MCHR1Q99705 422 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 SF3B5Q9BWJ5 86 aaKnown RBP18.02■□□□□ 0.48
FOXA1-203ENST00000553751 HDHD5Q9BXW7 423 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 LIME1Q9H400 295 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 SLC9A8Q9Y2E8 581 aa18.02■□□□□ 0.48
FOXA1-203ENST00000553751 A0A087WUJ7 227 aa18.01■□□□□ 0.47
FOXA1-203ENST00000553751 COX5AP20674 150 aa18.01■□□□□ 0.47
FOXA1-203ENST00000553751 CDH12P55289 794 aa18.01■□□□□ 0.47
FOXA1-203ENST00000553751 C5orf46Q6UWT4 87 aa18.01■□□□□ 0.47
FOXA1-203ENST00000553751 SLC15A3Q8IY34 581 aa18.01■□□□□ 0.47
FOXA1-203ENST00000553751 OR9K2Q8NGE7 335 aa18.01■□□□□ 0.47
FOXA1-203ENST00000553751 VANGL1Q8TAA9 524 aaPredicted RBP18.01■□□□□ 0.47
FOXA1-203ENST00000553751 KISS1RQ969F8 398 aaPredicted RBP18.01■□□□□ 0.47
FOXA1-203ENST00000553751 PLEKHF2Q9H8W4 249 aa18.01■□□□□ 0.47
FOXA1-203ENST00000553751 MALT1Q9UDY8 824 aa18.01■□□□□ 0.47
FOXA1-203ENST00000553751 MRPL33O75394 65 aaKnown RBP18■□□□□ 0.47
FOXA1-203ENST00000553751 IGHV3-9P01782 118 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 IGHV1-2P23083 117 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 IL32P24001 234 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 LOXP28300 417 aaPredicted RBP18■□□□□ 0.47
FOXA1-203ENST00000553751 FAM69AQ5T7M9 428 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 FBXW9Q5XUX1 488 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 ZNF613Q6PF04 617 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 CASP12Q6UXS9 341 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 HACD2Q6Y1H2 254 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 GPAT4Q86UL3 456 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 TSPYL5Q86VY4 417 aaPredicted RBP18■□□□□ 0.47
FOXA1-203ENST00000553751 P3H2Q8IVL5 708 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 MICU2Q8IYU8 434 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 ZIC4Q8N9L1 334 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 TAAR8Q969N4 342 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 TMEM45BQ96B21 275 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 SLC25A36Q96CQ1 311 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 PIK3IP1Q96FE7 263 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 PCDHAC1Q9H158 963 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 EFCAB1Q9HAE3 211 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 SELENONQ9NZV5 590 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 GMPR2Q9P2T1 348 aaKnown RBP18■□□□□ 0.47
FOXA1-203ENST00000553751 SEC14L4Q9UDX3 406 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 PRR14LQ5THK1 2151 aa18■□□□□ 0.47
FOXA1-203ENST00000553751 TRAV36DV7A0A075B6V5 113 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 CPSF4LA6NMK7 179 aaKnown RBP17.99■□□□□ 0.47
FOXA1-203ENST00000553751 NME4O00746 187 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 OR2T1O43869 369 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 LYZL6O75951 148 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 VAMP5O95183 116 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 THY1P04216 161 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 NUDT2P50583 147 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 SLC7A2P52569 658 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 ENTPD8Q5MY95 495 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 BHLHA15Q7RTS1 189 aaPredicted RBP17.99■□□□□ 0.47
FOXA1-203ENST00000553751 PIGWQ7Z7B1 504 aa17.99■□□□□ 0.47
FOXA1-203ENST00000553751 RNF217Q8TC41 542 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms