RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 DOCK7Q96N67 2140 aa8.79□□□□□ -1
CHD8-204ENST00000553622 GPA33Q99795 319 aa8.79□□□□□ -1
CHD8-204ENST00000553622 PSD2Q9BQI7 771 aa8.79□□□□□ -1
CHD8-204ENST00000553622 DGCR6LQ9BY27 220 aa8.79□□□□□ -1
CHD8-204ENST00000553622 POTEKPQ9BYX7 375 aa8.79□□□□□ -1
CHD8-204ENST00000553622 C8orf4Q9NR00 106 aa8.79□□□□□ -1
CHD8-204ENST00000553622 TBC1D23Q9NUY8 699 aa8.79□□□□□ -1
CHD8-204ENST00000553622 ALKBH4Q9NXW9 302 aa8.79□□□□□ -1
CHD8-204ENST00000553622 SPRR3Q9UBC9 169 aa8.79□□□□□ -1
CHD8-204ENST00000553622 ATRXP46100 2492 aa8.78□□□□□ -1
CHD8-204ENST00000553622 COL6A6A6NMZ7 2263 aa8.78□□□□□ -1
CHD8-204ENST00000553622 ATMQ13315 3056 aa8.78□□□□□ -1
CHD8-204ENST00000553622 A0A0J9YW62 118 aa8.78□□□□□ -1
CHD8-204ENST00000553622 A0A1B0GTH9 108 aa8.78□□□□□ -1
CHD8-204ENST00000553622 LIPT2A6NK58 231 aa8.78□□□□□ -1
CHD8-204ENST00000553622 TTLL8A6PVC2 850 aa8.78□□□□□ -1
CHD8-204ENST00000553622 NPIPA2E9PIF3 369 aa8.78□□□□□ -1
CHD8-204ENST00000553622 C11orf98E9PRG8 122 aa8.78□□□□□ -1
CHD8-204ENST00000553622 NPIPA3F8WFD2 350 aa8.78□□□□□ -1
CHD8-204ENST00000553622 BLOC1S5-TXNDC5H3BN57 136 aa8.78□□□□□ -1
CHD8-204ENST00000553622 CDC42EP2O14613 210 aa8.78□□□□□ -1
CHD8-204ENST00000553622 ZNHIT1O43257 154 aa8.78□□□□□ -1
CHD8-204ENST00000553622 OR2T1O43869 369 aa8.78□□□□□ -1
CHD8-204ENST00000553622 HCN1O60741 890 aa8.78□□□□□ -1
CHD8-204ENST00000553622 NPIPB7O75200 414 aa8.78□□□□□ -1
CHD8-204ENST00000553622 SERPINI2O75830 405 aa8.78□□□□□ -1
CHD8-204ENST00000553622 AKR7A3O95154 331 aa8.78□□□□□ -1
CHD8-204ENST00000553622 SNAP29O95721 258 aa8.78□□□□□ -1
CHD8-204ENST00000553622 ACTL6AO96019 429 aa8.78□□□□□ -1
CHD8-204ENST00000553622 MT-ATP6P00846 226 aa8.78□□□□□ -1
CHD8-204ENST00000553622 BGLAPP02818 100 aa8.78□□□□□ -1
CHD8-204ENST00000553622 IGFBP1P08833 259 aaPredicted RBP8.78□□□□□ -1
CHD8-204ENST00000553622 IMPDH2P12268 514 aa8.78□□□□□ -1
CHD8-204ENST00000553622 ZNF26P17031 533 aaPredicted RBP8.78□□□□□ -1
CHD8-204ENST00000553622 FPR3P25089 353 aa8.78□□□□□ -1
CHD8-204ENST00000553622 FKBP2P26885 142 aaKnown RBP8.78□□□□□ -1
CHD8-204ENST00000553622 GRPRP30550 384 aa8.78□□□□□ -1
CHD8-204ENST00000553622 RPL4P36578 427 aaKnown RBP8.78□□□□□ -1
CHD8-204ENST00000553622 CLK1P49759 484 aaKnown RBP8.78□□□□□ -1
CHD8-204ENST00000553622 DIO1P49895 249 aa8.78□□□□□ -1
CHD8-204ENST00000553622 SUCLG1P53597 346 aaKnown RBP8.78□□□□□ -1
CHD8-204ENST00000553622 CSNK2A1P68400 391 aaPredicted RBP8.78□□□□□ -1
CHD8-204ENST00000553622 SLC35A1P78382 337 aa8.78□□□□□ -1
CHD8-204ENST00000553622 LTBQ06643 244 aa8.78□□□□□ -1
CHD8-204ENST00000553622 TAF11Q15544 211 aa8.78□□□□□ -1
CHD8-204ENST00000553622 SLC36A3Q495N2 470 aa8.78□□□□□ -1
CHD8-204ENST00000553622 PRR30Q53SZ7 412 aaPredicted RBP8.78□□□□□ -1
CHD8-204ENST00000553622 CLEC12AQ5QGZ9 265 aa8.78□□□□□ -1
CHD8-204ENST00000553622 PDSS1Q5T2R2 415 aa8.78□□□□□ -1
CHD8-204ENST00000553622 FAM69AQ5T7M9 428 aa8.78□□□□□ -1
CHD8-204ENST00000553622 KDM4DQ6B0I6 523 aa8.78□□□□□ -1
CHD8-204ENST00000553622 TMPRSS11FQ6ZWK6 438 aa8.78□□□□□ -1
CHD8-204ENST00000553622 SLC46A3Q7Z3Q1 461 aa8.78□□□□□ -1
CHD8-204ENST00000553622 OR52L1Q8NGH7 329 aa8.78□□□□□ -1
CHD8-204ENST00000553622 MFSD8Q8NHS3 518 aa8.78□□□□□ -1
CHD8-204ENST00000553622 TEX47Q8TBZ9 253 aa8.78□□□□□ -1
CHD8-204ENST00000553622 CYGBQ8WWM9 190 aa8.78□□□□□ -1
CHD8-204ENST00000553622 DNAJC9Q8WXX5 260 aa8.78□□□□□ -1
CHD8-204ENST00000553622 ZHX1-C8orf76Q96EF9 292 aa8.78□□□□□ -1
CHD8-204ENST00000553622 PTDSS2Q9BVG9 487 aa8.78□□□□□ -1
CHD8-204ENST00000553622 NDEL1Q9GZM8 345 aa8.78□□□□□ -1
CHD8-204ENST00000553622 TOR3AQ9H497 397 aa8.78□□□□□ -1
CHD8-204ENST00000553622 EGLN3Q9H6Z9 239 aa8.78□□□□□ -1
CHD8-204ENST00000553622 FKRPQ9H9S5 495 aa8.78□□□□□ -1
CHD8-204ENST00000553622 SMPD3Q9NY59 655 aaPredicted RBP8.78□□□□□ -1
CHD8-204ENST00000553622 USE1Q9NZ43 259 aa8.78□□□□□ -1
CHD8-204ENST00000553622 IL20RAQ9UHF4 553 aa8.78□□□□□ -1
CHD8-204ENST00000553622 ZNF229Q9UJW7 825 aa8.78□□□□□ -1
CHD8-204ENST00000553622 HDGFL3Q9Y3E1 203 aa8.78□□□□□ -1
CHD8-204ENST00000553622 USP24Q9UPU5 2620 aa8.78□□□□□ -1
CHD8-204ENST00000553622 PRRC2CQ9Y520 2896 aaKnown RBP8.78□□□□□ -1
CHD8-204ENST00000553622 ALPK2Q86TB3 2170 aa8.78□□□□□ -1
CHD8-204ENST00000553622 SPTA1P02549 2419 aa8.78□□□□□ -1
CHD8-204ENST00000553622 IGHV3-15A0A0B4J1V0 119 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 HTR3EA5X5Y0 456 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 M0R082 166 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 CXCL13O43927 109 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 WISP2O76076 250 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 SYNGR4O95473 234 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 IGHG3P01860 377 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 ADORA3P0DMS8 318 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 OSMP13725 252 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 AHCYP23526 432 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 SLC9A3P48764 834 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 LHX2P50458 406 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 CLDN15P56746 228 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 CLDN18P56856 261 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 CARD18P57730 90 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 RPS3AP61247 264 aaKnown RBP8.77□□□□□ -1.01
CHD8-204ENST00000553622 NFATC3Q12968 1075 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 MFSD13AQ14CX5 517 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 RFX4Q33E94 735 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 ZBED5Q49AG3 693 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 ZNF620Q6ZNG0 422 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 TMPPEQ6ZT21 453 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 ESPNLQ6ZVH7 1005 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 GGNQ86UU5 652 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 IGFN1Q86VF2 1251 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 KIF18BQ86Y91 864 aa8.77□□□□□ -1.01
CHD8-204ENST00000553622 SIAH3Q8IW03 269 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms