RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 IMPG1Q17R60 797 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 IQCCQ4KMZ1 466 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 TEX35Q5T0J7 233 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 C1QTNF12Q5T7M4 302 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 C9orf135Q5VTT2 229 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 LRIG3Q6UXM1 1119 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 RINLQ6ZS11 566 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 FRMD7Q6ZUT3 714 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 MTDHQ86UE4 582 aaKnown RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 SLC22A9Q8IVM8 553 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 TMCO5AQ8N6Q1 288 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 FAM71CQ8NEG0 241 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 OR2T11Q8NH01 316 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 CLHC1Q8NHS4 586 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 RFWD2Q8NHY2 731 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 PIGXQ8TBF5 258 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 SLC25A43Q8WUT9 341 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 PPCDCQ96CD2 204 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 BOD1Q96IK1 185 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 METTL2AQ96IZ6 378 aaKnown RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 ARL5BQ96KC2 179 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 TSSK3Q96PN8 268 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 HOXD1Q9GZZ0 328 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 PLK3Q9H4B4 646 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 ZCCHC4Q9H5U6 513 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 CA10Q9NS85 328 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 KCNE5Q9UJ90 142 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 MOKQ9UQ07 419 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 IGHV1-18A0A0C4DH31 117 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SERINC4A6NH21 518 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 B9A039 149 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 H3BNH8 94 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 GPR171O14626 319 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 AKAP10O43572 662 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 DNPH1O43598 174 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 BCAS1O75363 584 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 MRPL33O75394 65 aaKnown RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 PMS2P2O95744 297 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 PGCP20142 388 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ATP6V1C1P21283 382 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 APEX1P27695 318 aaKnown RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ECHS1P30084 290 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SERPINF1P36955 418 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 IDH3GP51553 393 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 CHN2P52757 468 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ARFIP2P53365 341 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SLURP1P55000 103 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SESN3P58005 492 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ACTG1P63261 375 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 H3F3AP84243 136 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 RIN1Q13671 783 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 TRIP10Q15642 601 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 PRR31Q5SQ13 230 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 PDZK1Q5T2W1 519 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 TSPO2Q5TGU0 170 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 CASP12Q6UXS9 341 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ETV3LQ6ZN32 361 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 TIFABQ6ZNK6 161 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SPATC1Q76KD6 591 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF572Q7Z3I7 529 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SLC46A3Q7Z3Q1 461 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 LCA5Q86VQ0 697 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF614Q8N883 585 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF540Q8NDQ6 660 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 PSMA8Q8TAA3 256 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SNX18Q96RF0 628 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 VRK1Q99986 396 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 THUMPD3Q9BV44 507 aaKnown RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 CCDC106Q9BWC9 280 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ACTRT3Q9BYD9 372 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 NMUR2Q9GZQ4 415 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 LAT2Q9GZY6 243 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 IQCGQ9H095 443 aaKnown RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SERHL2Q9H4I8 314 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SEC61A2Q9H9S3 476 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 RRAGDQ9NQL2 400 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SLC7A10Q9NS82 523 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ACER3Q9NUN7 267 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 C1orf109Q9NX04 203 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 SH3BP4Q9P0V3 963 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 EMCNQ9ULC0 261 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 FLVCR1Q9Y5Y0 555 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 ARHGAP32A7KAX9 2087 aa6.3□□□□□ -1.4
ATXN3-219ENST00000553488 POC1B-GALNT4F8VUJ3 575 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 G3V2L1 256 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 GTPBP1O00178 669 aaKnown RBP6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SCAMP2O15127 329 aaKnown RBP6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SEC22BO75396 215 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 SNRPAP09012 282 aaKnown RBP6.29□□□□□ -1.4
ATXN3-219ENST00000553488 DAOP14920 347 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 MPGP29372 298 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 CALCRP30988 508 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 HILS1P60008 231 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 PRPS1P60891 318 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 RPL38P63173 70 aaKnown RBP6.29□□□□□ -1.4
ATXN3-219ENST00000553488 LGALS3BPQ08380 585 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 MERTKQ12866 999 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 TP53BP2Q13625 1128 aa6.29□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF141Q15928 474 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms