RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 C1orf162Q8NEQ5 155 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 PMM1Q92871 262 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 ZNF524Q96C55 264 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 ARL5BQ96KC2 179 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 PKNOX2Q96KN3 472 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 ZBTB18Q99592 522 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 VRK1Q99986 396 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 CCDC106Q9BWC9 280 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 TAPBPLQ9BX59 468 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 CENPHQ9H3R5 247 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 EXOSC3Q9NQT5 275 aaKnown RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 SLC17A5Q9NRA2 495 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 ANK3Q12955 4377 aaKnown RBP8.69□□□□□ -1.02
ACTN1-208ENST00000553370 PRSS51A0A1B0GVH4 220 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 ZNF587BE7ETH6 402 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 AP3D1O14617 1153 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 GPIP06744 558 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 ITGA5P08648 1049 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 APEHP13798 732 aaKnown RBP8.69□□□□□ -1.02
ACTN1-208ENST00000553370 NCF2P19878 526 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-208ENST00000553370 TACR3P29371 465 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 APOBEC3AP31941 199 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-208ENST00000553370 SLC16A1P53985 500 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 IL1RL1Q01638 556 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 LOXL1Q08397 574 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-208ENST00000553370 OR7A5Q15622 319 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 CHI3L2Q15782 390 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 GABRA6Q16445 453 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 SMU1Q2TAY7 513 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 KRT71Q3SY84 523 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 FAM174BQ3ZCQ3 159 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 C11orf71Q6IPW1 123 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 VHLLQ6RSH7 139 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 FRRS1Q6ZNA5 592 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 DNM1P46Q6ZS02 220 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 SPATA19Q7Z5L4 167 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 RNF130Q86XS8 419 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 CMIPQ8IY22 773 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 PEX5LQ8IYB4 626 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 KIRREL3Q8IZU9 778 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 CADM2Q8N3J6 435 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 OR8J2Q8NGG1 315 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 MIPOL1Q8TD10 442 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 NANOS1Q8WY41 292 aaKnown RBP8.69□□□□□ -1.02
ACTN1-208ENST00000553370 NEURL3Q96EH8 262 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 ZIM3Q96PE6 472 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 PANX1Q96RD7 426 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 AKTIPQ9H8T0 292 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 ADPRHL2Q9NX46 363 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 ASIC5Q9NY37 505 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 LGALS13Q9UHV8 139 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 KCNE5Q9UJ90 142 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 TRAPPC4Q9Y296 219 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 FLVCR1Q9Y5Y0 555 aa8.69□□□□□ -1.02
ACTN1-208ENST00000553370 CUBNO60494 3623 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 GOLGA8QA0A0J9YX86 632 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 LOC100289279A0A1B0GTE1 492 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 TMEM72A0PK05 275 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 GOLGA8OA6NCC3 632 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 TMEM247A6NEH6 219 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 CFAP73A6NFT4 308 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ELOA3DA6NLF2 546 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-208ENST00000553370 CLDN24A6NM45 220 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 E9PBE3 544 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 GOLGA8NF8WBI6 632 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 KLF11O14901 512 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ZNF208O43345 1280 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 LMX1BO60663 402 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 DNAJA2O60884 412 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 LY6HO94772 140 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ANP32DO95626 131 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 CRYAAP02489 173 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 SERPINE1P05121 402 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 GSTP1P09211 210 aaKnown RBP8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ARAFP10398 606 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 LBPP18428 481 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 MPGP29372 298 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ABCE1P61221 599 aaKnown RBP8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ELOA3BQ3SY89 546 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 HIKESHIQ53FT3 197 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 SPANXN4Q5MJ08 99 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 SAXO2Q658L1 398 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 TMEM225Q6GV28 225 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 PAQR6Q6TCH4 344 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ADGRG3Q86Y34 549 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ZNF440Q8IYI8 595 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ZNF781Q8N8C0 355 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 POMGNT2Q8NAT1 580 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 FAM71CQ8NEG0 241 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ELOA3Q8NG57 546 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 OR10H5Q8NGA6 315 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 OR9K2Q8NGE7 335 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 PNPT1Q8TCS8 783 aaKnown RBP8.68□□□□□ -1.02
ACTN1-208ENST00000553370 C10orf105Q8TEF2 133 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 CNOT9Q92600 299 aaKnown RBP8.68□□□□□ -1.02
ACTN1-208ENST00000553370 PROX1Q92786 737 aa8.68□□□□□ -1.02
ACTN1-208ENST00000553370 TRNT1Q96Q11 434 aaKnown RBP8.68□□□□□ -1.02
ACTN1-208ENST00000553370 PAIP2Q9BPZ3 127 aaKnown RBP8.68□□□□□ -1.02
ACTN1-208ENST00000553370 ROPN1BQ9BZX4 212 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms