RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TPRX1Q8N7U7 411 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 KLHL30-AS1Q8NEE0 82 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 CCDC148Q8NFR7 591 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 OR4K14Q8NGD5 310 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 MCUR1Q96AQ8 359 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 SLC25A38Q96DW6 304 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 MTG1Q9BT17 334 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-209ENST00000553280 PAXXQ9BUH6 204 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 ILKAPQ9H0C8 392 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-209ENST00000553280 Q9H3A6 140 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 FOLH1BQ9HBA9 442 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 DDX18Q9NVP1 670 aaKnown RBP3.79□□□□□ -1.8
SCFD1-209ENST00000553280 STAP1Q9ULZ2 295 aa3.79□□□□□ -1.8
SCFD1-209ENST00000553280 UBQLN1Q9UMX0 589 aaKnown RBP3.79□□□□□ -1.8
SCFD1-209ENST00000553280 IGKV1D-8A0A087WSZ0 117 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 A0A0G2JRQ6 117 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 A0A1W2PQ72 361 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 OR2AG2A6NM03 316 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 C9JVG2 144 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 H0YIV9 168 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 DFNA5O60443 496 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 TBL1XO60907 577 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 LGI1O95970 557 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 KRT6AP02538 564 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 SEMG1P04279 462 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 CT62P0C5K7 136 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 ANXA8P13928 327 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 GATA1P15976 413 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-209ENST00000553280 HTR1FP30939 366 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 NTSP30990 170 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 VHLP40337 213 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 SYKP43405 635 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 MEOX2P50222 304 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 CDH6P55285 790 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 BCL2L1Q07817 233 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 ZNF658Q5TYW1 1059 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-209ENST00000553280 ANXA8L1Q5VT79 327 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 C11orf71Q6IPW1 123 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 LRRC74BQ6ZQY2 392 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 BZW1Q7L1Q6 419 aaKnown RBP3.78□□□□□ -1.8
SCFD1-209ENST00000553280 ARCQ7LC44 396 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 BIVMQ86UB2 503 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 APOBEC3FQ8IUX4 373 aaKnown RBP3.78□□□□□ -1.8
SCFD1-209ENST00000553280 FTMTQ8N4E7 242 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 OR7G2Q8NG99 324 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 AGR3Q8TD06 166 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 TSNARE1Q96NA8 513 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 KIR2DL4Q99706 377 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 MRPL45Q9BRJ2 306 aaKnown RBP3.78□□□□□ -1.8
SCFD1-209ENST00000553280 UBXN6Q9BZV1 441 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 TMEM185BQ9H7F4 350 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 ZNF702PQ9H963 129 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 HOXC10Q9NYD6 342 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 KLHL21Q9UJP4 597 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 KCNIP3Q9Y2W7 256 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 STARD10Q9Y365 291 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 COL5A2P05997 1499 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-209ENST00000553280 GON4LQ3T8J9 2241 aa3.78□□□□□ -1.8
SCFD1-209ENST00000553280 TUBAL3A6NHL2 446 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 LOC110117498-PIK3R3F6TDL0 507 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 K7N7A8 449 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 TOM1O60784 492 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 CDH16O75309 829 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 OR7A10O76100 309 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 THY1P04216 161 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 SERPIND1P05546 499 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 AQP1P29972 269 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 KCNJ2P63252 427 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 PARP15Q460N3 678 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 SAMD4BQ5PRF9 694 aaKnown RBP3.77□□□□□ -1.81
SCFD1-209ENST00000553280 C1orf185Q5T7R7 199 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 MARC1Q5VT66 337 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 SLC25A48Q6ZT89 311 aaKnown RBP3.77□□□□□ -1.81
SCFD1-209ENST00000553280 MOB1BQ7L9L4 216 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 GTSCR1Q86UQ5 136 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 ERI1Q8IV48 349 aaKnown RBP3.77□□□□□ -1.81
SCFD1-209ENST00000553280 RHOXF1Q8NHV9 184 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 FAM81AQ8TBF8 368 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 BRSK1Q8TDC3 778 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 TSEN15Q8WW01 171 aaKnown RBP3.77□□□□□ -1.81
SCFD1-209ENST00000553280 ELMO1Q92556 727 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 ZNF184Q99676 751 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-209ENST00000553280 RIOK1Q9BRS2 568 aaKnown RBP3.77□□□□□ -1.81
SCFD1-209ENST00000553280 FAIM2Q9BWQ8 316 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 SELENOIQ9C0D9 397 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 ISG20L2Q9H9L3 353 aaKnown RBP3.77□□□□□ -1.81
SCFD1-209ENST00000553280 KIAA1257Q9ULG3 409 aa3.77□□□□□ -1.81
SCFD1-209ENST00000553280 NINLQ9Y2I6 1382 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 TTC41PQ6P2S7 1318 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 IGHV1OR21-1A0A087WYE8 117 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 SMCO3A2RU48 225 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 CASQ2O14958 399 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-209ENST00000553280 PSTPIP1O43586 416 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 HCRTR1O43613 425 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 SERF1AO75920 110 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 C1orf105O95561 183 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 FTH1P02794 183 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 UBTFL1P0CB47 393 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-209ENST00000553280 CCDC166P0CW27 439 aa3.76□□□□□ -1.81
SCFD1-209ENST00000553280 RBMY1CP0DJD4 496 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms