RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CCDC188H7C350 402 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 PLPP1O14494 284 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 SYNGR3O43761 229 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 GMFGO60234 142 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 TMPRSS11DO60235 418 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 CYTIPO60759 359 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 PTP4A3O75365 173 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 EEDO75530 441 aaKnown RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 FOXH1O75593 365 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 ERAL1O75616 437 aaKnown RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 TSPAN15O95858 294 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 CHEK2O96017 543 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 GRPP07492 148 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 SBK3P0C264 359 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 NHLRC4P0CG21 123 aaPredicted RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 CTAGE8P0CG41 777 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 MLNP12872 115 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 ETS1P14921 441 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 HPGDP15428 266 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 FSTP19883 344 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 PSMA4P25789 261 aaKnown RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 ELK4P28324 431 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 BSGP35613 385 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 GP5P40197 560 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 PAFAH1B1P43034 410 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 ALDH18A1P54886 795 aaKnown RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 ARF1P84077 181 aaKnown RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 DDX39BQ13838 428 aaKnown RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 CCNYL2Q5T2Q4 361 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 GSTA5Q7RTV2 222 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 MISPQ8IVT2 679 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 CTAGE4Q8IX94 777 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 LRRC57Q8N9N7 239 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 NUP37Q8NFH4 326 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 CEP70Q8NHQ1 597 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 HUS1BQ8NHY5 278 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 ST7LQ8TDW4 575 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 RAB1CQ92928 201 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 TIMD4Q96H15 378 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 C1orf147Q96MC9 270 aaPredicted RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 SLC38A2Q96QD8 506 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 OSBPL9Q96SU4 736 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 MRI1Q9BV20 369 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 SPATA5L1Q9BVQ7 753 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 FAIM2Q9BWQ8 316 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 TMEM185BQ9H7F4 350 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 CXorf36Q9H7Y0 433 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 NOX4Q9NPH5 578 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 MED17Q9NVC6 651 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 C1RLQ9NZP8 487 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 RNF14Q9UBS8 474 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 GIMAP2Q9UG22 337 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 SLC23A1Q9UHI7 598 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 GPR160Q9UJ42 338 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 MAGEL2Q9UJ55 1249 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 ADAM29Q9UKF5 820 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 C19orf53Q9UNZ5 99 aaPredicted RBP4.42□□□□□ -1.7
CKAP4-203ENST00000553039 CMAHPQ9Y471 501 aa4.42□□□□□ -1.7
CKAP4-203ENST00000553039 ZCWPW2A0A1B0GU75 182 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 TMEM129A0AVI4 362 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 CCDC151A5D8V7 595 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 FAM90A18PA6NE21 464 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 FAM90A16PA6NEW6 464 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 NCF1BA6NI72 391 aaPredicted RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 AGAP5A6NIR3 686 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 AQP7P3A6NL99 342 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 FAM90A9PA6NNJ1 464 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 NCF1CA8MVU1 366 aaPredicted RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 FAM90A5PA8MXJ8 464 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 WNT9BO14905 357 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 DNPH1O43598 174 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 CCNT2O60583 730 aaKnown RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 GPANK1O95872 356 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 IGHV3-9P01782 118 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 KLK1P06870 262 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 SFTPBP07988 381 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 H2AFB1P0C5Y9 115 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 H2AFB2P0C5Z0 115 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 FAM90A15PP0C7V4 464 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 FAM90A14PP0C7W9 464 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 NCF1P14598 390 aaPredicted RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 MPGP29372 298 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 MPIP34949 423 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 THBS4P35443 961 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 BPIFB3P59826 476 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 UBE2NP61088 152 aaKnown RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 CSNK2A1P68400 391 aaPredicted RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 EMX1Q04741 257 aaPredicted RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 DCTN2Q13561 401 aaKnown RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 TGFBIQ15582 683 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 OASLQ15646 514 aaKnown RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 C18orf21Q32NC0 220 aaPredicted RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 ELFN2Q5R3F8 820 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 TEX35Q5T0J7 233 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 OTUD3Q5T2D3 398 aaPredicted RBP4.41□□□□□ -1.7
CKAP4-203ENST00000553039 LIPJQ5W064 366 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 ATG16L1Q676U5 607 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 FAM45BPQ6NSW5 357 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 AADACL2Q6P093 401 aa4.41□□□□□ -1.7
CKAP4-203ENST00000553039 SLC48A1Q6P1K1 146 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms