RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 NRG3P56975 720 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 PPP2CBP62714 309 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 PPP2CAP67775 309 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 SHC2P98077 582 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 CDK3Q00526 305 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 IRF4Q15306 451 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 DUSP5Q16690 384 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 ODF4Q2M2E3 257 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 LINC00303Q3SY05 128 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 GXYLT1Q4G148 440 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 MRPL2Q5T653 305 aaKnown RBP11.38□□□□□ -0.59
HDAC7-230ENST00000552960 METTL11BQ5VVY1 283 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 TBC1D3GQ6DHY5 549 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 TBC1D3CQ6IPX1 549 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 TMEM64Q6YI46 380 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 TMEFF1Q8IYR6 380 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 TBC1D3Q8IZP1 549 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-230ENST00000552960 OR2A1Q8NGT9 310 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 KLHL15Q96M94 604 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 HDAC8Q9BY41 377 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 MTHFD2LQ9H903 347 aaPredicted RBP11.38□□□□□ -0.59
HDAC7-230ENST00000552960 FKRPQ9H9S5 495 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 ADAM29Q9UKF5 820 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 TRAPPC13A5PLN9 417 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 MEIS3P1A6NDR6 274 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 VEGFDO43915 354 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 SPDEFO95238 335 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 GAAP10253 952 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 TAS2R43P59537 309 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 BOLLQ8N9W6 283 aaKnown RBP11.38□□□□□ -0.59
HDAC7-230ENST00000552960 SMRP1Q8NCR6 262 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 CNOT9Q92600 299 aaKnown RBP11.38□□□□□ -0.59
HDAC7-230ENST00000552960 OR1F2PQ96R84 312 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 ABRACLQ9P1F3 81 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 KCNMB2Q9Y691 235 aa11.38□□□□□ -0.59
HDAC7-230ENST00000552960 KLF4O43474 513 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 ATP1B1P05026 303 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 HTR2AP28223 471 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 FNTBP49356 437 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 TMEM69Q5SWH9 247 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 HACD4Q5VWC8 232 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 HEPHL1Q6MZM0 1159 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 SFXN5Q8TD22 340 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 FCAMRQ8WWV6 532 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 NARS2Q96I59 477 aaKnown RBP11.37□□□□□ -0.59
HDAC7-230ENST00000552960 PTCHD1Q96NR3 888 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 GAL3ST1Q99999 423 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-230ENST00000552960 CMC2Q9NRP2 79 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 MED31Q9Y3C7 131 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 PIAS3Q9Y6X2 628 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 A0A1W2PQU0 124 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 PDCD5O14737 125 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 CREBL2O60519 120 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-230ENST00000552960 KRT33AO76009 404 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 UGT2B7P16662 529 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 DPTQ07507 201 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 TRMT12Q53H54 448 aaKnown RBP11.37□□□□□ -0.59
HDAC7-230ENST00000552960 DMKNQ6E0U4 476 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-230ENST00000552960 OR8K3Q8NH51 312 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 PELI1Q96FA3 418 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 LINC00615Q96LM1 132 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-230ENST00000552960 PRSS27Q9BQR3 290 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 ANKRD19PQ9H560 264 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 SPHK1Q9NYA1 384 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 DUXAA6NLW8 204 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 ANXA2P2A6NMY6 339 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 IMPA2O14732 288 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 RPL4P36578 427 aaKnown RBP11.37□□□□□ -0.59
HDAC7-230ENST00000552960 DEFA5Q01523 94 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 ENPP2Q13822 863 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 ARHGAP19Q14CB8 494 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 TRAM1Q15629 374 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 METRNLQ641Q3 311 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 PXKQ7Z7A4 578 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 LNX2Q8N448 690 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 OR2L5Q8NG80 312 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 OR5M1Q8NGP8 315 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 SYNPO2LQ9H987 977 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 LIN7BQ9HAP6 207 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 IFT46Q9NQC8 304 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 NTMQ9P121 344 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 KLHL9Q9P2J3 617 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 APOBEC3BQ9UH17 382 aaKnown RBP11.37□□□□□ -0.59
HDAC7-230ENST00000552960 SLC35A3Q9Y2D2 325 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 HRH3Q9Y5N1 445 aa11.37□□□□□ -0.59
HDAC7-230ENST00000552960 LRRC72A6NJI9 287 aa11.36□□□□□ -0.59
HDAC7-230ENST00000552960 RP2O75695 350 aa11.36□□□□□ -0.59
HDAC7-230ENST00000552960 SERPINA3P01011 423 aa11.36□□□□□ -0.59
HDAC7-230ENST00000552960 HOXB2P14652 356 aa11.36□□□□□ -0.59
HDAC7-230ENST00000552960 ZNF136P52737 540 aa11.36□□□□□ -0.59
HDAC7-230ENST00000552960 TRA2BP62995 288 aaKnown RBP11.36□□□□□ -0.59
HDAC7-230ENST00000552960 SNRPNP63162 240 aaKnown RBP11.36□□□□□ -0.59
HDAC7-230ENST00000552960 DYRK1AQ13627 763 aa11.36□□□□□ -0.59
HDAC7-230ENST00000552960 MLF2Q15773 248 aaPredicted RBP11.36□□□□□ -0.59
HDAC7-230ENST00000552960 DEFB134Q4QY38 66 aa11.36□□□□□ -0.59
HDAC7-230ENST00000552960 NHLRC3Q5JS37 347 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms