RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 IMPDH2P12268 514 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 PRG2P13727 222 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 COX5AP20674 150 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 CXCR1P25024 350 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 ACVR1BP36896 505 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 COPZ1P61923 177 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 H3F3AP84243 136 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 TAB1Q15750 504 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 ZNF311Q5JNZ3 666 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 SERPINA11Q86U17 422 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 CLIP4Q8N3C7 705 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 APH1AQ96BI3 265 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 THOC1Q96FV9 657 aaKnown RBP13.6□□□□□ -0.23
BRF1-220ENST00000552127 USB1Q9BQ65 265 aaKnown RBP13.6□□□□□ -0.23
BRF1-220ENST00000552127 RABEP2Q9H5N1 569 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 TMEM160Q9NX00 188 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 VAPAQ9P0L0 249 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 LPAR3Q9UBY5 353 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 LAMP3Q9UQV4 416 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 NOSIPQ9Y314 301 aaKnown RBP13.6□□□□□ -0.23
BRF1-220ENST00000552127 GMEB1Q9Y692 573 aa13.6□□□□□ -0.23
BRF1-220ENST00000552127 A0A1W2PP18 115 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 EIF1BO60739 113 aaKnown RBP13.59□□□□□ -0.23
BRF1-220ENST00000552127 EDF1O60869 148 aaKnown RBP13.59□□□□□ -0.23
BRF1-220ENST00000552127 LYZL6O75951 148 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 PGM3O95394 542 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 PLAUP00749 431 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 NCF2P19878 526 aaPredicted RBP13.59□□□□□ -0.23
BRF1-220ENST00000552127 IGHV1-2P23083 117 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 CFPP27918 469 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 RPS4XP62701 263 aaKnown RBP13.59□□□□□ -0.23
BRF1-220ENST00000552127 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 CCDC103Q8IW40 242 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 C10orf111Q8N326 155 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 ZNF611Q8N823 705 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 NFKBIDQ8NI38 313 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 HSD17B8Q92506 261 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 SLC35B4Q969S0 331 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 SIKE1Q9BRV8 207 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 TMEM204Q9BSN7 226 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 NAA11Q9BSU3 229 aaPredicted RBP13.59□□□□□ -0.23
BRF1-220ENST00000552127 SLCO5A1Q9H2Y9 848 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 IKZF5Q9H5V7 419 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 ZNF385DQ9H6B1 395 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 NPHS2Q9NP85 383 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.59□□□□□ -0.23
BRF1-220ENST00000552127 CORO2BQ9UQ03 480 aa13.59□□□□□ -0.23
BRF1-220ENST00000552127 YLPM1P49750 1951 aaKnown RBP13.58□□□□□ -0.24
BRF1-220ENST00000552127 GPIP06744 558 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 ETS2P15036 469 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 PRKAR1BP31321 381 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 FBXW9Q5XUX1 488 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 PAQR6Q6TCH4 344 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 SEZ6L2Q6UXD5 910 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 DNM1P46Q6ZS02 220 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 UBE2J2Q8N2K1 259 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 C3orf49Q96BT1 292 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 TRMT61AQ96FX7 289 aaKnown RBP13.58□□□□□ -0.24
BRF1-220ENST00000552127 CPPED1Q9BRF8 314 aaPredicted RBP13.58□□□□□ -0.24
BRF1-220ENST00000552127 SHARPINQ9H0F6 387 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 NGBQ9NPG2 151 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 DCTN4Q9UJW0 460 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 TRIM33Q9UPN9 1127 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 SLC9A8Q9Y2E8 581 aa13.58□□□□□ -0.24
BRF1-220ENST00000552127 LIPT2A6NK58 231 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 A8MVM7 634 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 EVPLLA8MZ36 301 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 TMEM229AB2RXF0 380 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 OVOL3O00110 214 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 HS3ST1O14792 307 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 FRS3O43559 492 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 MRPL33O75394 65 aaKnown RBP13.57□□□□□ -0.24
BRF1-220ENST00000552127 IGHV3-9P01782 118 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 GPX2P18283 190 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 GGT1P19440 569 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 CDK6Q00534 326 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 BNIP2Q12982 314 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 CEACAM7Q14002 265 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 OR7A5Q15622 319 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 STK11Q15831 433 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 NCMAPQ5T1S8 102 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 OTUD3Q5T2D3 398 aaPredicted RBP13.57□□□□□ -0.24
BRF1-220ENST00000552127 REEP3Q6NUK4 255 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 CASP12Q6UXS9 341 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 DHDDSQ86SQ9 333 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 KRT73Q86Y46 540 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 TMEM38AQ9H6F2 299 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 ESRP2Q9H6T0 727 aaKnown RBP13.57□□□□□ -0.24
BRF1-220ENST00000552127 MALT1Q9UDY8 824 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 LEF1Q9UJU2 399 aaPredicted RBP13.57□□□□□ -0.24
BRF1-220ENST00000552127 RNF115Q9Y4L5 304 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 FLVCR1Q9Y5Y0 555 aa13.57□□□□□ -0.24
BRF1-220ENST00000552127 A0A0G2JND7 137 aa13.56□□□□□ -0.24
BRF1-220ENST00000552127 AQP7P3A6NL99 342 aa13.56□□□□□ -0.24
BRF1-220ENST00000552127 ANGPT2O15123 496 aa13.56□□□□□ -0.24
BRF1-220ENST00000552127 CD3EP07766 207 aa13.56□□□□□ -0.24
BRF1-220ENST00000552127 SRD5A1P18405 259 aa13.56□□□□□ -0.24
BRF1-220ENST00000552127 NTF4P34130 210 aa13.56□□□□□ -0.24
BRF1-220ENST00000552127 HOXC5Q00444 222 aa13.56□□□□□ -0.24
BRF1-220ENST00000552127 SCARB2Q14108 478 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms