RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SKAP2O75563 359 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-220ENST00000551716 UGT2B17O75795 530 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 VAMP5O95183 116 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 ADRA2CP18825 462 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 SDC1P18827 310 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 ZFP36P26651 326 aaKnown RBP13.15□□□□□ -0.3
CACNB3-220ENST00000551716 RYKP34925 604 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 PGM1P36871 562 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 HPCAL1P37235 193 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 SNTB2Q13425 540 aaKnown RBP13.15□□□□□ -0.3
CACNB3-220ENST00000551716 MMEL1Q495T6 779 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 OTUD3Q5T2D3 398 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-220ENST00000551716 DCAF12L2Q5VW00 463 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 AP1ARQ63HQ0 302 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 TMEM225Q6GV28 225 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 SFXN5Q8TD22 340 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 DNAJA3Q96EY1 480 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
CACNB3-220ENST00000551716 GPA33Q99795 319 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 ZNF275Q9NSD4 429 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-220ENST00000551716 ATAD3AQ9NVI7 634 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 NINJ2Q9NZG7 142 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 BAIAP2L1Q9UHR4 511 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 ATP6V1HQ9UI12 483 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 CORINQ9Y5Q5 1042 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 A0A096LPE4 126 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 TMED7-TICAM2A0A0A6YYA0 188 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 A0A1W2PPZ6 126 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 WNT9BO14905 357 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 HPXP02790 462 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 GPIP06744 558 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 GUSBP08236 651 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 IMPDH2P12268 514 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 CCNA2P20248 432 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 EFNA1P20827 205 aaPredicted RBP13.14□□□□□ -0.31
CACNB3-220ENST00000551716 NR4A1P22736 598 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 POLR2HP52434 150 aaKnown RBP13.14□□□□□ -0.31
CACNB3-220ENST00000551716 ZP4Q12836 540 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 ARHGAP11BQ3KRB8 267 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 TIFABQ6ZNK6 161 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 RELL1Q8IUW5 271 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 FAM71CQ8NEG0 241 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 TSPYL1Q9H0U9 437 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 C7orf69Q9H7B7 122 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 ZNF665Q9H7R5 613 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 EXOSC3Q9NQT5 275 aaKnown RBP13.14□□□□□ -0.31
CACNB3-220ENST00000551716 EXD2Q9NVH0 621 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 KCNE5Q9UJ90 142 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 TMED7Q9Y3B3 224 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 NOX1Q9Y5S8 564 aa13.14□□□□□ -0.31
CACNB3-220ENST00000551716 POC1B-GALNT4F8VUJ3 575 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 FCMRO60667 390 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 NEFHP12036 1026 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 GCH1P30793 250 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 IDH2P48735 452 aaKnown RBP13.13□□□□□ -0.31
CACNB3-220ENST00000551716 TUBA1BP68363 451 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 TUBA4AP68366 448 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 RFTN2Q52LD8 501 aaPredicted RBP13.13□□□□□ -0.31
CACNB3-220ENST00000551716 TUBA1AQ71U36 451 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 GPAT4Q86UL3 456 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 ARFGAP2Q8N6H7 521 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 CLHC1Q8NHS4 586 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 RNF217Q8TC41 542 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 PRPF18Q99633 342 aaKnown RBP13.13□□□□□ -0.31
CACNB3-220ENST00000551716 LINC00470Q9BZP3 86 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 SEC61A2Q9H9S3 476 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 CRLF2Q9HC73 371 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 POLE3Q9NRF9 147 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 PRDM4Q9UKN5 801 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 ZNF346Q9UL40 294 aaKnown RBP13.13□□□□□ -0.31
CACNB3-220ENST00000551716 MKLN1Q9UL63 735 aa13.13□□□□□ -0.31
CACNB3-220ENST00000551716 AQP7P3A6NL99 342 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 TMEM114B3SHH9 223 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 SCAMP2O15127 329 aaKnown RBP13.12□□□□□ -0.31
CACNB3-220ENST00000551716 AGR2O95994 175 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 CELA3BP08861 270 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 TCN1P20061 433 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-220ENST00000551716 MATN1P21941 496 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 GLRXP35754 106 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 RPS23P62266 143 aaKnown RBP13.12□□□□□ -0.31
CACNB3-220ENST00000551716 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
CACNB3-220ENST00000551716 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 CFAP157Q5JU67 520 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 SAXO2Q658L1 398 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 KRT80Q6KB66 452 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 EMBQ6PCB8 327 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 DOK3Q7L591 496 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 C16orf62Q7Z3J2 963 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 SIGLECL1Q8N7X8 197 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 TMEM99Q8N816 258 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 OR5D16Q8NGK9 328 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 DVL3Q92997 716 aaPredicted RBP13.12□□□□□ -0.31
CACNB3-220ENST00000551716 YIPF5Q969M3 257 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 SLC25A28Q96A46 364 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 LRRC58Q96CX6 371 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 MRPL37Q9BZE1 423 aaKnown RBP13.12□□□□□ -0.31
CACNB3-220ENST00000551716 ZNF350Q9GZX5 532 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 NOX3Q9HBY0 568 aa13.12□□□□□ -0.31
CACNB3-220ENST00000551716 OSGIN1Q9UJX0 560 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms