RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 DDCP20711 480 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 TYK2P29597 1187 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 PAX2Q02962 417 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 PAX8Q06710 450 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 SKP2Q13309 424 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 GGTA1PQ4G0N0 100 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 CCDC137Q6PK04 289 aaKnown RBP11.3□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF620Q6ZNG0 422 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 OLIG3Q7RTU3 272 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 AAED1Q7RTV5 226 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 TREML1Q86YW5 311 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 TMEM139Q8IV31 216 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF614Q8N883 585 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 PTGR2Q8N8N7 351 aaPredicted RBP11.3□□□□□ -0.6
SNRPF-203ENST00000551316 COX18Q8N8Q8 333 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 MAGEE2Q8TD90 523 aaPredicted RBP11.3□□□□□ -0.6
SNRPF-203ENST00000551316 MAGOHBQ96A72 148 aaKnown RBP11.3□□□□□ -0.6
SNRPF-203ENST00000551316 UPRTQ96BW1 309 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 LRRC39Q96DD0 335 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 SLC47A1Q96FL8 570 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF75AQ96N20 296 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 SLC30A2Q9BRI3 323 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 THUMPD3Q9BV44 507 aaKnown RBP11.3□□□□□ -0.6
SNRPF-203ENST00000551316 CCDC106Q9BWC9 280 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 ACPTQ9BZG2 426 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 DUSP13Q9UII6 198 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 POLR3KQ9Y2Y1 108 aaPredicted RBP11.3□□□□□ -0.6
SNRPF-203ENST00000551316 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
SNRPF-203ENST00000551316 ALMS1Q8TCU4 4167 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 VSTM5A8MXK1 200 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF587BE7ETH6 402 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 DNAJA2O60884 412 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 IGHV4-59P01825 116 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 THRBP10828 461 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 ZNF35P13682 527 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 CCNA2P20248 432 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 GLRXP35754 106 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 KRTAP10-11P60412 298 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 ARF1P84077 181 aaKnown RBP11.29□□□□□ -0.6
SNRPF-203ENST00000551316 GLIPR1L2Q4G1C9 344 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 TMEM255AQ5JRV8 349 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 ANKRD26P1Q6NSI1 321 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 SZRD1Q7Z422 152 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 CDRT4Q8N9R6 151 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 POMGNT2Q8NAT1 580 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 OR9K2Q8NGE7 335 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 ST7LQ8TDW4 575 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 ATP6V1E2Q96A05 226 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 ZHX1-C8orf76Q96EF9 292 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 SERHL2Q9H4I8 314 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 DENND2DQ9H6A0 471 aaPredicted RBP11.29□□□□□ -0.6
SNRPF-203ENST00000551316 BRF2Q9HAW0 419 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 NMRAL1Q9HBL8 299 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 HHATLQ9HCP6 504 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 PARPBPQ9NWS1 579 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 KCNE5Q9UJ90 142 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 KCNE3Q9Y6H6 103 aa11.29□□□□□ -0.6
SNRPF-203ENST00000551316 ZC3H12DA2A288 527 aaKnown RBP11.28□□□□□ -0.6
SNRPF-203ENST00000551316 GPR37O15354 613 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 MYZAPP0CAP1 466 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 FUT4P22083 530 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 ERVS71-1P61550 626 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 PLAURQ03405 335 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 LCP2Q13094 533 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 CBFBQ13951 182 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 HEPACAMQ14CZ8 416 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 POU5F2Q8N7G0 328 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 ZSCAN4Q8NAM6 433 aaPredicted RBP11.28□□□□□ -0.6
SNRPF-203ENST00000551316 FBXO36Q8NEA4 188 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 MAIP1Q8WWC4 291 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 CIDECQ96AQ7 238 aaPredicted RBP11.28□□□□□ -0.6
SNRPF-203ENST00000551316 MS4A14Q96JA4 679 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 TBX15Q96SF7 602 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 TAAR3PQ9P1P4 343 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 VPS29Q9UBQ0 182 aa11.28□□□□□ -0.6
SNRPF-203ENST00000551316 TTC36A6NLP5 189 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 A8MXK9 166 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 GTPBP1O00178 669 aaKnown RBP11.27□□□□□ -0.61
SNRPF-203ENST00000551316 ZNF264O43296 627 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 DNPH1O43598 174 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 HLA-HP01893 362 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 UBL4AP11441 157 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 ZNF14P17017 642 aaPredicted RBP11.27□□□□□ -0.61
SNRPF-203ENST00000551316 IVDP26440 423 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 NTSP30990 170 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 POU6F2P78424 691 aaPredicted RBP11.27□□□□□ -0.61
SNRPF-203ENST00000551316 ROR2Q01974 943 aaKnown RBP11.27□□□□□ -0.61
SNRPF-203ENST00000551316 GLO1Q04760 184 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 C2orf80Q0P641 193 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 TSTQ16762 297 aaKnown RBP11.27□□□□□ -0.61
SNRPF-203ENST00000551316 NKPD1Q17RQ9 610 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 ZNF385BQ569K4 471 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 FAM71E1Q6IPT2 247 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 ZBED8Q8IZ13 594 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 MMGT1Q8N4V1 131 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 TMEM99Q8N816 258 aa11.27□□□□□ -0.61
SNRPF-203ENST00000551316 SLC25A43Q8WUT9 341 aaPredicted RBP11.27□□□□□ -0.61
SNRPF-203ENST00000551316 ST8SIA1Q92185 356 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms