RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 CR1LQ2VPA4 569 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 MRPL2Q5T653 305 aaKnown RBP12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 LINGO2Q7L985 606 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 NUDCD3Q8IVD9 361 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 POMGNT2Q8NAT1 580 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 VPS37AQ8NEZ2 397 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 OR1K1Q8NGR3 316 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 C20orf27Q9GZN8 174 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 ADAM19Q9H013 955 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 RLIMQ9NVW2 624 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 TMEM45AQ9NWC5 275 aa12.88□□□□□ -0.35
TMEM106C-216ENST00000551305 NBEAL1Q6ZS30 2694 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 A0A096LPE4 126 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 A0A1W2PPZ6 126 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 AQP7P3A6NL99 342 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 UPK3AO75631 287 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 GPIP06744 558 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 NUDT17P0C025 328 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 ZNF23P17027 643 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 HNF1AP20823 631 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 CALCRP30988 508 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 IL2RGP31785 369 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 P2RY4P51582 365 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 NAAAQ02083 359 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 COX20Q5RI15 118 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 TMEM225Q6GV28 225 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 ANKRD16Q6P6B7 361 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 CMIPQ8IY22 773 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 ZCCHC24Q8N2G6 241 aaKnown RBP12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 BCL2L2Q92843 193 aaPredicted RBP12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 TESCQ96BS2 214 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 BOD1Q96IK1 185 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 TEX37Q96LM6 180 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 TRNT1Q96Q11 434 aaKnown RBP12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 KCNS3Q9BQ31 491 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 SF3B5Q9BWJ5 86 aaKnown RBP12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 ADPRHL2Q9NX46 363 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 LGALS13Q9UHV8 139 aa12.87□□□□□ -0.35
TMEM106C-216ENST00000551305 B9A039 149 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 FAAHO00519 579 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 TYROBPO43914 113 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 STAMBPO95630 424 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 GSNP06396 782 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 CECR9P0C854 216 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 IL7RP16871 459 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 RPS4Y1P22090 263 aaKnown RBP12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 CXCR1P25024 350 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 S100A3P33764 101 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 CDKN2CP42773 168 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 UBE2NP61088 152 aaKnown RBP12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 SQLEQ14534 574 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 MAPK11Q15759 364 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 FAM174BQ3ZCQ3 159 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 NIPAL3Q6P499 406 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 LRRC74BQ6ZQY2 392 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 CREB3L2Q70SY1 520 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 PNPT1Q8TCS8 783 aaKnown RBP12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 ZIM3Q96PE6 472 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 ALKBH3Q96Q83 286 aaPredicted RBP12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 KATNB1Q9BVA0 655 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 PLK3Q9H4B4 646 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 MTHFD2LQ9H903 347 aaPredicted RBP12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 OBP2BQ9NPH6 170 aa12.86□□□□□ -0.35
TMEM106C-216ENST00000551305 CCDC154A6NI56 674 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 CRYAAP02489 173 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 CELA3BP08861 270 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 NR2F1P10589 423 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 ACAA2P42765 397 aaKnown RBP12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 MAP2K6P52564 334 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 ABCE1P61221 599 aaKnown RBP12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 UFM1P61960 85 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 HGFACQ04756 655 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 EFNB3Q15768 340 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 CHI3L2Q15782 390 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 C1QTNF12Q5T7M4 302 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 LIPNQ5VXI9 398 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 ZNF621Q6ZSS3 439 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 ABHD12BQ7Z5M8 362 aaPredicted RBP12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 MYPOPQ86VE0 399 aaPredicted RBP12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 VRK2Q86Y07 508 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 EPHX4Q8IUS5 362 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 KDM8Q8N371 416 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 CADM2Q8N3J6 435 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 CCDC115Q96NT0 180 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 NELFAQ9H3P2 528 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 MYOZ1Q9NP98 299 aaPredicted RBP12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 CRNNQ9UBG3 495 aaPredicted RBP12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 BTNL2Q9UIR0 455 aa12.85□□□□□ -0.35
TMEM106C-216ENST00000551305 SH3PXD2BA1X283 911 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 E9PBE3 544 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 PGRP06401 933 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 DBIP07108 87 aaKnown RBP12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 MYZAPP0CAP1 466 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 DAOP14920 347 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 LBPP18428 481 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 IL12AP29459 219 aa12.84□□□□□ -0.35
TMEM106C-216ENST00000551305 THBS4P35443 961 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms