RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 BEX5Q5H9J7 111 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 MRPL2Q5T653 305 aaKnown RBP11.95□□□□□ -0.5
NUP188-211ENST00000550219 CYP2R1Q6VVX0 501 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 ZNF836Q6ZNA1 936 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 ZNF704Q6ZNC4 412 aaPredicted RBP11.95□□□□□ -0.5
NUP188-211ENST00000550219 STK32CQ86UX6 486 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 COMTD1Q86VU5 262 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 CLIP4Q8N3C7 705 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 SMYD1Q8NB12 490 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 ATP6V1C2Q8NEY4 427 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 POP5Q969H6 163 aaKnown RBP11.95□□□□□ -0.5
NUP188-211ENST00000550219 TRIM15Q9C019 465 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 CACYBPQ9HB71 228 aaKnown RBP11.95□□□□□ -0.5
NUP188-211ENST00000550219 ADPRHL2Q9NX46 363 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 RPS6KA6Q9UK32 745 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 BAG5Q9UL15 447 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 SAMD4AQ9UPU9 718 aaKnown RBP11.95□□□□□ -0.5
NUP188-211ENST00000550219 TCRBV3S1A0A5B6 114 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 TRIM64A6NGJ6 449 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 TRIM64BA6NI03 449 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 ANKRD65E5RJM6 399 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 EIF4E2O60573 245 aaKnown RBP11.94□□□□□ -0.5
NUP188-211ENST00000550219 CIB2O75838 187 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 STAMBPO95630 424 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 PLAUP00749 431 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 CSTAP01040 98 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 HEXAP06865 529 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 FESP07332 822 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 ZNF239Q16600 458 aaKnown RBP11.94□□□□□ -0.5
NUP188-211ENST00000550219 NRF1Q16656 503 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 GLIPR1L2Q4G1C9 344 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 C1orf146Q5VVC0 180 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 STAC2Q6ZMT1 411 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 BEND4Q6ZU67 534 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 ZNF771Q7L3S4 317 aaPredicted RBP11.94□□□□□ -0.5
NUP188-211ENST00000550219 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 SLC26A7Q8TE54 656 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 ABHD3Q8WU67 409 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 LZICQ8WZA0 190 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 CNOT9Q92600 299 aaKnown RBP11.94□□□□□ -0.5
NUP188-211ENST00000550219 OSTF1Q92882 214 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 PLPPR2Q96GM1 343 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 COX4I2Q96KJ9 171 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 ARHGDIGQ99819 225 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 SRXN1Q9BYN0 137 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 LAT2Q9GZY6 243 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 ARMC7Q9H6L4 198 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 FANCFQ9NPI8 374 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 EXOSC3Q9NQT5 275 aaKnown RBP11.94□□□□□ -0.5
NUP188-211ENST00000550219 PLSCR4Q9NRQ2 329 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 RLIMQ9NVW2 624 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 PRDM4Q9UKN5 801 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 CARD8Q9Y2G2 431 aa11.94□□□□□ -0.5
NUP188-211ENST00000550219 FLNAP21333 2647 aaKnown RBP11.94□□□□□ -0.5
NUP188-211ENST00000550219 PCNX3Q9H6A9 2034 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 GTPBP1O00178 669 aaKnown RBP11.93□□□□□ -0.5
NUP188-211ENST00000550219 ADAMDEC1O15204 470 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 PRKD3O94806 890 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 NTN1O95631 604 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 LY6G6DO95868 133 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 SEMG1P04279 462 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 LINGO3P0C6S8 592 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 UBL4AP11441 157 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 PPP3CBP16298 524 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 ELK4P28324 431 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 PTH2RP49190 550 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 CARD18P57730 90 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 ACTR3P61158 418 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 SKP2Q13309 424 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 CCNIQ14094 377 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 TSC22D1Q15714 1073 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 TMEM201Q5SNT2 666 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 CBLN3Q6UW01 205 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 PLEKHM3Q6ZWE6 761 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 VTCN1Q7Z7D3 282 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 ZNF440Q8IYI8 595 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 FAM86B1Q8N7N1 296 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 TOR1AIP2Q8NFQ8 470 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 RNF128Q8TEB7 428 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 TMEM171Q8WVE6 324 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 PYURFQ96I23 114 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 HSH2DQ96JZ2 352 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 LRGUKQ96M69 825 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 GLRX2Q9NS18 164 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 ICAM5Q9UMF0 924 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 ACANP16112 2415 aa11.93□□□□□ -0.5
NUP188-211ENST00000550219 RAI1Q7Z5J4 1906 aaPredicted RBP11.92□□□□□ -0.5
NUP188-211ENST00000550219 IGHV3-15A0A0B4J1V0 119 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 FAM171A2A8MVW0 826 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 ZNF264O43296 627 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 KLF4O43474 513 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 ZNF682O95780 498 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 UMPSP11172 480 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 PCSK6P29122 969 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 EIF1P41567 113 aaKnown RBP11.92□□□□□ -0.5
NUP188-211ENST00000550219 ACAA2P42765 397 aaKnown RBP11.92□□□□□ -0.5
NUP188-211ENST00000550219 P2RX1P51575 399 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 NR1H2P55055 460 aa11.92□□□□□ -0.5
NUP188-211ENST00000550219 KPNB1Q14974 876 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms