RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 DDIT4Q9NX09 232 aa2.53□□□□□ -2
CNOT2-216ENST00000548939 TRIM10Q9UDY6 481 aa2.53□□□□□ -2
CNOT2-216ENST00000548939 HPCAL4Q9UM19 191 aa2.53□□□□□ -2
CNOT2-216ENST00000548939 ABCG2Q9UNQ0 655 aa2.53□□□□□ -2
CNOT2-216ENST00000548939 ZNF835Q9Y2P0 537 aa2.53□□□□□ -2
CNOT2-216ENST00000548939 FBXO7Q9Y3I1 522 aa2.53□□□□□ -2
CNOT2-216ENST00000548939 SNX10Q9Y5X0 201 aa2.53□□□□□ -2
CNOT2-216ENST00000548939 DOCK10Q96BY6 2186 aa2.53□□□□□ -2
CNOT2-216ENST00000548939 MPDZO75970 2070 aa2.53□□□□□ -2.01
CNOT2-216ENST00000548939 CCDC88CQ9P219 2028 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 TRAV18A0A075B6X5 111 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 OR5K4A6NMS3 321 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 E7EQ34 232 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 M0QYV0 167 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 BUB1O43683 1085 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 CD5LO43866 347 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 PFKFB2O60825 505 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 JCHAINP01591 159 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 RPN1P04843 607 aaKnown RBP2.52□□□□□ -2.01
CNOT2-216ENST00000548939 IVLP07476 585 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 SLC2A3P11169 496 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF24P17028 368 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 RORAP35398 523 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 PRPHP41219 470 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 FNTAP49354 379 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 AP3M2P53677 418 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 NUP107P57740 925 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 ARF5P84085 180 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF33BQ06732 778 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 TNK1Q13470 666 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 BECN1Q14457 450 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 RFTN2Q52LD8 501 aaPredicted RBP2.52□□□□□ -2.01
CNOT2-216ENST00000548939 PYCR3Q53H96 274 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.52□□□□□ -2.01
CNOT2-216ENST00000548939 PMF1Q6P1K2 205 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 LRRC75A-AS1Q8N1F1 130 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 RPRMLQ8N4K4 120 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF781Q8N8C0 355 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 ZNRF1Q8ND25 227 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 LIPHQ8WWY8 451 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 PRMT1Q99873 361 aaKnown RBP2.52□□□□□ -2.01
CNOT2-216ENST00000548939 C17orf62Q9BQA9 187 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 TRIM62Q9BVG3 475 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 TNMDQ9H2S6 317 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 FN3KQ9H479 309 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF160Q9HCG1 818 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 AGPAT3Q9NRZ7 376 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 CISHQ9NSE2 258 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 CD84Q9UIB8 345 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 SLC17A4Q9Y2C5 497 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CNOT2-216ENST00000548939 NSG1A0A0A6YYJ2 146 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 A0A1W2PPW3 197 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 TRBC2A0A5B9 178 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 ILVBLA1L0T0 632 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 OR5H15A6NDH6 313 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 TUBAL3A6NHL2 446 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 SLC9B1P1A6NJY1 282 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 OR52A4PA6NMU1 304 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 A8MUI8 341 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 UBFD1O14562 309 aaKnown RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 PGRMC2O15173 223 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 GRAP2O75791 330 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 ZMPSTE24O75844 475 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 GFPT2O94808 682 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 FYNP06241 537 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 HBQ1P09105 142 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 P0C879 139 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 MMP11P24347 488 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 EEF1DP29692 281 aaKnown RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 SSTR1P30872 391 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 PEX19P40855 299 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 NSG1P42857 185 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 ALDH3B1P43353 468 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 OR3A3P47888 321 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 WNT4P56705 351 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 KRTAP10-10P60014 251 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 IFI35P80217 286 aaPredicted RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 DCDP81605 110 aaKnown RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 GNA12Q03113 381 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 MAPK11Q15759 364 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 RWDD4Q6NW29 188 aaKnown RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF544Q6NX49 715 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 RBPMS2Q6ZRY4 209 aaKnown RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 CROCCP3Q8IVE0 287 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 CCDC65Q8IXS2 484 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 PRSS58Q8IYP2 241 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 ENTHD1Q8IYW4 607 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 CAMKVQ8NCB2 501 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 OR2L5Q8NG80 312 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 LINC01560Q8TB33 94 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 FAM57AQ8TBR7 257 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 GRK7Q8WTQ7 553 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 HAS2Q92819 552 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 SNX21Q969T3 373 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 ISG20Q96AZ6 181 aaKnown RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 RBM18Q96H35 190 aaKnown RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 ZNF396Q96N95 335 aaPredicted RBP2.51□□□□□ -2.01
CNOT2-216ENST00000548939 AP1M1Q9BXS5 423 aa2.51□□□□□ -2.01
CNOT2-216ENST00000548939 HES7Q9BYE0 225 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms