RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SLC36A3Q495N2 470 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 ZNF620Q6ZNG0 422 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 TRILQ7L0X0 811 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 MAMDC2Q7Z304 686 aaPredicted RBP25.88■■□□□ 1.73
BRF1-213ENST00000548421 KIF18BQ86Y91 864 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 CLDN22Q8N7P3 220 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 EXD3Q8N9H8 876 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 FANK1Q8TC84 345 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 LUZP4Q9P127 313 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 SIGLEC7Q9Y286 467 aa25.88■■□□□ 1.73
BRF1-213ENST00000548421 TRAV27A0A087WT01 109 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 A0A1W2PNR3 127 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 LIPT2A6NK58 231 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 H3BN98 237 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 HCN1O60741 890 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 ACTL6AO96019 429 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 OR7A5Q15622 319 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 ZBED5Q49AG3 693 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 GGNQ86UU5 652 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 SIAH3Q8IW03 269 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 ADI1Q9BV57 179 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 TSPAN10Q9H1Z9 355 aaPredicted RBP25.87■■□□□ 1.73
BRF1-213ENST00000548421 EXO5Q9H790 373 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 TRAPPC4Q9Y296 219 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 CDH10Q9Y6N8 788 aa25.87■■□□□ 1.73
BRF1-213ENST00000548421 HIST1H2ABP04908 130 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 GTF2E2P29084 291 aaKnown RBP25.86■■□□□ 1.73
BRF1-213ENST00000548421 STARP49675 285 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 C19orf57Q0VDD7 668 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 RPL13AP3Q6NVV1 102 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 TMPPEQ6ZT21 453 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 ESPNLQ6ZVH7 1005 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 HIST3H2AQ7L7L0 130 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 DHRSXQ8N5I4 330 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 OR51A7Q8NH64 312 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 HIST1H2ACQ93077 130 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 ABTB1Q969K4 478 aaPredicted RBP25.86■■□□□ 1.73
BRF1-213ENST00000548421 MIB2Q96AX9 1013 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 EGLN3Q9H6Z9 239 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 ALKBH4Q9NXW9 302 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 IL20Q9NYY1 176 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 CORINQ9Y5Q5 1042 aa25.86■■□□□ 1.73
BRF1-213ENST00000548421 TLN1Q9Y490 2541 aaKnown RBP25.86■■□□□ 1.73
BRF1-213ENST00000548421 FZD7O75084 574 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 PTP4A3O75365 173 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 RCBTB2O95199 551 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 PMS2P2O95744 297 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 SFTPCP11686 197 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 BMP7P18075 431 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 GRPRP30550 384 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 POLR2IP36954 125 aaKnown RBP25.85■■□□□ 1.73
BRF1-213ENST00000548421 LHX2P50458 406 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 CRISP1P54107 249 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 CLDN20P56880 219 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 RPS4XP62701 263 aaKnown RBP25.85■■□□□ 1.73
BRF1-213ENST00000548421 TAF11Q15544 211 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 ANKDD1AQ495B1 522 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 WLSQ5T9L3 541 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 NANOGNBQ7Z5D8 188 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 Q8NA96 180 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 ZNF555Q8NEP9 628 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 CYGBQ8WWM9 190 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 TNFRSF13CQ96RJ3 184 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 ASPNQ9BXN1 380 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 GRIP2Q9C0E4 1043 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 SLC25A18Q9H1K4 315 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 OR52D1Q9H346 318 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 FAM118AQ9NWS6 357 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 KIAA1549Q9HCM3 1950 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 A0A0J9YW62 118 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 SULT2B1O00204 365 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 SEC14L5O43304 696 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 IGFBP1P08833 259 aaPredicted RBP25.85■■□□□ 1.73
BRF1-213ENST00000548421 POU1F1P28069 291 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 DIO1P49895 249 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 FHL1Q13642 323 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 SMARCD3Q6STE5 483 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 FAM180AQ6UWF9 173 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 TEX19Q8NA77 164 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 OR5J2Q8NH18 312 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 TEX47Q8TBZ9 253 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 OSTF1Q92882 214 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 CNTNAP3BQ96NU0 1288 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 CNTNAP3Q9BZ76 1288 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 PLA2G12AQ9BZM1 189 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 MCCC2Q9HCC0 563 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 HIF3AQ9Y2N7 669 aa25.85■■□□□ 1.73
BRF1-213ENST00000548421 ERVH48-1M5A8F1 160 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 EIF1AYO14602 144 aaKnown RBP25.84■■□□□ 1.73
BRF1-213ENST00000548421 TNFSF11O14788 317 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 EPHA2P29317 976 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 OR2B6P58173 313 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 FXYD6P3P58550 94 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 CSNK2A1P68400 391 aaPredicted RBP25.84■■□□□ 1.73
BRF1-213ENST00000548421 BCL2A1Q16548 175 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 CTU2Q2VPK5 515 aaKnown RBP25.84■■□□□ 1.73
BRF1-213ENST00000548421 C6orf52Q5T4I8 152 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 VASNQ6EMK4 673 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 UBQLNLQ8IYU4 475 aa25.84■■□□□ 1.73
BRF1-213ENST00000548421 SCAIQ8N9R8 606 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms