RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 HPCAP84074 193 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 H3F3AP84243 136 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 STX3Q13277 289 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 SQLEQ14534 574 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 TMEM225Q6GV28 225 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 C17orf78Q8N4C9 275 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 ANKFN1Q8N957 763 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 ZIC4Q8N9L1 334 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 FAM71CQ8NEG0 241 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 C1orf162Q8NEQ5 155 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 PMM1Q92871 262 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC38A2Q96QD8 506 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 PAIP2Q9BPZ3 127 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC35A5Q9BS91 424 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 NUF2Q9BZD4 464 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 SEC61A2Q9H9S3 476 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 PNPOQ9NVS9 261 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 ADPRHL2Q9NX46 363 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 RAB21Q9UL25 225 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 NDUFS8O00217 210 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 DNPH1O43598 174 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 EIF1BO60739 113 aaKnown RBP10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 STAMBPO95630 424 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 AGR2O95994 175 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 CRYAAP02489 173 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 GKN3PP0CG01 181 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 IL7RP16871 459 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 ZNF23P17027 643 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 FKBP2P26885 142 aaKnown RBP10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 THBS2P35442 1172 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 HTR3AP46098 478 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 SELENOPP49908 381 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 UBE2NP61088 152 aaKnown RBP10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 TBRG1Q3YBR2 411 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 TNFAIP8L3Q5GJ75 292 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 SAXO2Q658L1 398 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 NIPAL3Q6P499 406 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 ANKRD16Q6P6B7 361 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 RNF130Q86XS8 419 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 CADM2Q8N3J6 435 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 OR9K2Q8NGE7 335 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 OR8J2Q8NGG1 315 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 MIPOL1Q8TD10 442 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 SAP130Q9H0E3 1048 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 CA10Q9NS85 328 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 RLIMQ9NVW2 624 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 TMEM45AQ9NWC5 275 aa10.4□□□□□ -0.74
TRAFD1-205ENST00000548277 PRSS51A0A1B0GVH4 220 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 B9A039 149 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 LYNX1G3V0Z9 82 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 HMGN4O00479 90 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 ZNF208O43345 1280 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 TCF21O43680 179 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 SNUPNO95149 360 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 CHRM4P08173 479 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 LYNX1P0DP58 116 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 ITGA2P17301 1181 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 LBPP18428 481 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 CXCR1P25024 350 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 CALCRP30988 508 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 KHKP50053 298 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 NAAAQ02083 359 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 RUNX1T1Q06455 604 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 BST1Q10588 318 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 ADIPOQQ15848 244 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 SPANXN4Q5MJ08 99 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 ANXA8L1Q5VT79 327 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 HHATQ5VTY9 493 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 PAQR6Q6TCH4 344 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 LINGO2Q7L985 606 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 KDM8Q8N371 416 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 ANKRD42Q8N9B4 389 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 POMGNT2Q8NAT1 580 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 VPS37AQ8NEZ2 397 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 OR1K1Q8NGR3 316 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 PNPT1Q8TCS8 783 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 WDR60Q8WVS4 1066 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 ALKBH3Q96Q83 286 aaPredicted RBP10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 SNX18Q96RF0 628 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 RAB1BQ9H0U4 201 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 EXOSC3Q9NQT5 275 aaKnown RBP10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 POLE3Q9NRF9 147 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 TMEFF2Q9UIK5 374 aaPredicted RBP10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 HAO1Q9UJM8 370 aa10.39□□□□□ -0.75
TRAFD1-205ENST00000548277 CFAP73A6NFT4 308 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 LIPT2A6NK58 231 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 ZNF587BE7ETH6 402 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 hCG_2039718K7EN88 272 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 UPK3AO75631 287 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 RGS9O75916 674 aaPredicted RBP10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 GSNP06396 782 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 PGRP06401 933 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 GPIP06744 558 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 CELA3BP08861 270 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 CECR9P0C854 216 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 NR2F1P10589 423 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 DAOP14920 347 aa10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 APEX1P27695 318 aaKnown RBP10.38□□□□□ -0.75
TRAFD1-205ENST00000548277 S100A3P33764 101 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms