RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 ZNF440Q8IYI8 595 aa12.54□□□□□ -0.4
TROAP-203ENST00000546735 FBXL14Q8N1E6 418 aa12.54□□□□□ -0.4
TROAP-203ENST00000546735 OR9K2Q8NGE7 335 aa12.54□□□□□ -0.4
TROAP-203ENST00000546735 TMEM45BQ96B21 275 aa12.54□□□□□ -0.4
TROAP-203ENST00000546735 AMBRA1Q9C0C7 1298 aa12.54□□□□□ -0.4
TROAP-203ENST00000546735 BARX1Q9HBU1 254 aaPredicted RBP12.54□□□□□ -0.4
TROAP-203ENST00000546735 ADPRHL2Q9NX46 363 aa12.54□□□□□ -0.4
TROAP-203ENST00000546735 ZIM2Q9NZV7 527 aa12.54□□□□□ -0.4
TROAP-203ENST00000546735 DCTN4Q9UJW0 460 aa12.54□□□□□ -0.4
TROAP-203ENST00000546735 AQP7P3A6NL99 342 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 KLF11O14901 512 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 UBDO15205 165 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 ZCCHC18P0CG32 403 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 NCF2P19878 526 aaPredicted RBP12.53□□□□□ -0.4
TROAP-203ENST00000546735 MPGP29372 298 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 POLR2JP52435 117 aaKnown RBP12.53□□□□□ -0.4
TROAP-203ENST00000546735 MAP2K6P52564 334 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 COPZ1P61923 177 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 HOXC5Q00444 222 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 NRF1Q16656 503 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 HIKESHIQ53FT3 197 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 RNF220Q5VTB9 566 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 WBP2NLQ6ICG8 309 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 SLC2A7Q6PXP3 512 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 SERPINA11Q86U17 422 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 DEPDC4Q8N2C3 294 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 MAL2Q969L2 176 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 ITCHQ96J02 903 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 ADAD1Q96M93 576 aaKnown RBP12.53□□□□□ -0.4
TROAP-203ENST00000546735 RHNO1Q9BSD3 238 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 TAPBPLQ9BX59 468 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 RMND5AQ9H871 391 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 SDR39U1Q9NRG7 319 aaPredicted RBP12.53□□□□□ -0.4
TROAP-203ENST00000546735 YAE1D1Q9NRH1 226 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 NKIRAS1Q9NYS0 192 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 CALML5Q9NZT1 146 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 AMDHD2Q9Y303 409 aa12.53□□□□□ -0.4
TROAP-203ENST00000546735 FAM234BA2RU67 622 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 A8MVM7 634 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 ATP6V1G2-DDX39BF2Z307 99 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 SELENOPP49908 381 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 P2RY4P51582 365 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 LARS2Q15031 903 aaKnown RBP12.52□□□□□ -0.41
TROAP-203ENST00000546735 C1orf140Q5VVS0 124 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 TMEM225Q6GV28 225 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 C17orf78Q8N4C9 275 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 ZNF525Q8N782 197 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 C1orf162Q8NEQ5 155 aaPredicted RBP12.52□□□□□ -0.41
TROAP-203ENST00000546735 GTF2H4Q92759 462 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 C3orf49Q96BT1 292 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 TLCD1Q96CP7 247 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.41
TROAP-203ENST00000546735 SPATA9Q9BWV2 254 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 PAIP1Q9H074 479 aaKnown RBP12.52□□□□□ -0.41
TROAP-203ENST00000546735 TMBIM4Q9HC24 238 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 CR1P17927 2039 aa12.52□□□□□ -0.41
TROAP-203ENST00000546735 A0A096LNT2 108 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 A0A0G2JPF8 293 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 HNRNPCL2B2RXH8 293 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 HNRNPCL3B7ZW38 293 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 CD5LO43866 347 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
TROAP-203ENST00000546735 LGI1O95970 557 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 HNRNPCL4P0DMR1 293 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 SLC18A1P54219 525 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 PRPS1P60891 318 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 TGFBR3Q03167 851 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 RAB35Q15286 201 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 ZNF311Q5JNZ3 666 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 PRAMEF8Q5VWM4 474 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 PRAMEF7Q5VXH5 474 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 ZNF544Q6NX49 715 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 MSANTD1Q6ZTZ1 278 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 CREB3L2Q70SY1 520 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 LINGO2Q7L985 606 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 EPHX4Q8IUS5 362 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 MIER2Q8N344 545 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 KDM8Q8N371 416 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 SLC25A36Q96CQ1 311 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 RSPO3Q9BXY4 272 aaPredicted RBP12.51□□□□□ -0.41
TROAP-203ENST00000546735 SEC14L4Q9UDX3 406 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 ZNF232Q9UNY5 417 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 MOKQ9UQ07 419 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 PCDHB14Q9Y5E9 798 aa12.51□□□□□ -0.41
TROAP-203ENST00000546735 TMEM247A6NEH6 219 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 TMEM229AB2RXF0 380 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 CLIC1O00299 241 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 NR5A2O00482 541 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 NPIPB7O75200 414 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 UPK3AO75631 287 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 KRT33AO76009 404 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 LY6HO94772 140 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 TUBA1BP68363 451 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 TUBA4AP68366 448 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 RGNQ15493 299 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 NIPAL3Q6P499 406 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 KLHL24Q6TFL4 600 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 CLEC2AQ6UVW9 174 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 EPGNQ6UW88 154 aa12.5□□□□□ -0.41
TROAP-203ENST00000546735 TUBA1AQ71U36 451 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms