RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TMEM27Q9HBJ8 222 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 AP3M1Q9Y2T2 418 aa10.52□□□□□ -0.73
YBX3-217ENST00000546164 NOSIPQ9Y314 301 aaKnown RBP10.52□□□□□ -0.73
YBX3-217ENST00000546164 IGKV1D-42A0A075B6H8 117 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 ELOA3DA6NLF2 546 aaPredicted RBP10.51□□□□□ -0.73
YBX3-217ENST00000546164 FAM220BPB1ANY3 271 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 SIAH2O43255 324 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 VAMP5O95183 116 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 OPN1SWP03999 348 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 THBDP07204 575 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 COX5AP20674 150 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 EDNRAP25101 427 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 P2RY4P51582 365 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 ITGADQ13349 1161 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 OR1Q1Q15612 314 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 OR7A5Q15622 319 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 ELOA3BQ3SY89 546 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 ALG10BQ5I7T1 473 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 OTUD3Q5T2D3 398 aaPredicted RBP10.51□□□□□ -0.73
YBX3-217ENST00000546164 SFRP5Q5T4F7 317 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 C8orf82Q6P1X6 216 aaPredicted RBP10.51□□□□□ -0.73
YBX3-217ENST00000546164 ZNF613Q6PF04 617 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 HACD2Q6Y1H2 254 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 RANBP3LQ86VV4 465 aaPredicted RBP10.51□□□□□ -0.73
YBX3-217ENST00000546164 LSRQ86X29 649 aaPredicted RBP10.51□□□□□ -0.73
YBX3-217ENST00000546164 CXorf67Q86X51 503 aaPredicted RBP10.51□□□□□ -0.73
YBX3-217ENST00000546164 TREML1Q86YW5 311 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 POU5F2Q8N7G0 328 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 TMEM99Q8N816 258 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 ELOA3Q8NG57 546 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 OR6S1Q8NH40 331 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 NINJ1Q92982 152 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 TMEM45BQ96B21 275 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 APH1AQ96BI3 265 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 ZNF775Q96BV0 537 aaPredicted RBP10.51□□□□□ -0.73
YBX3-217ENST00000546164 SLC47A1Q96FL8 570 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 HOPXQ9BPY8 73 aaPredicted RBP10.51□□□□□ -0.73
YBX3-217ENST00000546164 PTDSS2Q9BVG9 487 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 ACTR6Q9GZN1 396 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 PCDHAC1Q9H158 963 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 PLEKHF2Q9H8W4 249 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 MALT1Q9UDY8 824 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 PRSS50Q9UI38 385 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 SLC9A8Q9Y2E8 581 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 FLVCR1Q9Y5Y0 555 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 CELSR1Q9NYQ6 3014 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 ROS1P08922 2347 aa10.51□□□□□ -0.73
YBX3-217ENST00000546164 A0A087WUJ7 227 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 A0A1W2PPR1 153 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 ENO4A6NNW6 628 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 M0R3H8 397 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 OR2T1O43869 369 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 MRPL33O75394 65 aaKnown RBP10.5□□□□□ -0.73
YBX3-217ENST00000546164 AKR7A3O95154 331 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 ADAP00813 363 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 DNAJA1P31689 397 aaKnown RBP10.5□□□□□ -0.73
YBX3-217ENST00000546164 NTF4P34130 210 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 POU4F3Q15319 338 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 NPTX1Q15818 432 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 FAM69AQ5T7M9 428 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 FBXW9Q5XUX1 488 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 ANKRD34AQ69YU3 496 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 SSX8Q7RTT4 187 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 CPLX4Q7Z7G2 160 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 SLC15A3Q8IY34 581 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 ZNF100Q8IYN0 542 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 OR9K2Q8NGE7 335 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 OR6T1Q8NGN1 323 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 KISS1RQ969F8 398 aaPredicted RBP10.5□□□□□ -0.73
YBX3-217ENST00000546164 CMTM5Q96DZ9 223 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 KTI12Q96EK9 354 aaPredicted RBP10.5□□□□□ -0.73
YBX3-217ENST00000546164 PRR14Q9BWN1 585 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 EFCAB1Q9HAE3 211 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 PARPBPQ9NWS1 579 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 ADPRHL2Q9NX46 363 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 CMTM6Q9NX76 183 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 SELENONQ9NZV5 590 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 EDARQ9UNE0 448 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 RASD1Q9Y272 281 aa10.5□□□□□ -0.73
YBX3-217ENST00000546164 PRR14LQ5THK1 2151 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 TRAV36DV7A0A075B6V5 113 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 CCT8L1PA6NM43 557 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 AIM2O14862 343 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 KLF4O43474 513 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 IFNA14P01570 189 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 IGHV1-2P23083 117 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 IL32P24001 234 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 LOXP28300 417 aaPredicted RBP10.49□□□□□ -0.73
YBX3-217ENST00000546164 PRDX6P30041 224 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 GNGT1P63211 74 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 MFSD13AQ14CX5 517 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 BEX5Q5H9J7 111 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 FBXW10Q5XX13 1052 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 PAMR1Q6UXH9 720 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 LINC00114Q6XXX2 140 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 PIGWQ7Z7B1 504 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 ZIC4Q8N9L1 334 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 ADPRHL1Q8NDY3 354 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 OR2T12Q8NG77 320 aa10.49□□□□□ -0.73
YBX3-217ENST00000546164 OR4D11Q8NGI4 311 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms