RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 C3orf49Q96BT1 292 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 DDIT4LQ96D03 193 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CNRIP1Q96F85 164 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 PLA2G12AQ9BZM1 189 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 EIF5A2Q9GZV4 153 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 OR51J1Q9H342 316 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 METTL7AQ9H8H3 244 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PRDM7Q9NQW5 492 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 DUSP22Q9NRW4 184 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 GPATCH2Q9NW75 528 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 RBFOX1Q9NWB1 397 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 C19orf25Q9UFG5 118 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 TRAPPC4Q9Y296 219 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 KCNE3Q9Y6H6 103 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 NLRC5Q86WI3 1866 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PIGBOS1A0A0B4J2F0 54 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ZC3H12DA2A288 527 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 ZNF726A6NNF4 738 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 WASHC1A8K0Z3 465 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PRSS44E7EML9 344 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 WDPCPO95876 746 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PLGP00747 810 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 IFNA1P01562 189 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 MT-ND4P03905 459 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 OR2T7P0C7T2 308 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SHC1P29353 583 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 NKX6-1P78426 367 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 TMEM201Q5SNT2 666 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SFRP4Q6FHJ7 346 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 LYPD4Q6UWN0 246 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 B3GLCTQ6Y288 498 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 DPY19L2P2Q6ZN68 376 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 RASGRP3Q8IV61 690 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 BBS1Q8NFJ9 593 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 OR2T27Q8NH04 317 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 JSRP1Q96MG2 331 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 OR5B12Q96R08 314 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CTRCQ99895 268 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 NRIP3Q9NQ35 241 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CA14Q9ULX7 337 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 A0A087WV62 115 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 SRPX2O60687 465 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 LILRB5O75023 590 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SLC43A1O75387 559 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 IFNA10P01566 189 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 IFNA4P05014 189 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PRKXP51817 358 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CAPZA1P52907 286 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 MRPS10P82664 201 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 FABP5Q01469 135 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 GPR50Q13585 617 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 EIF2B1Q14232 305 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 ERV3-1Q14264 604 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 GFOD2Q3B7J2 385 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SLC35D3Q5M8T2 416 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PLXDC1Q8IUK5 500 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CCDC71Q8IV32 467 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 ETFBKMTQ8IXQ9 262 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PRR22Q8IZ63 422 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ARL14Q8N4G2 192 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 TMEM99Q8N816 258 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 AMER3Q8N944 861 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 POGLUT1Q8NBL1 392 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 OR51Q1Q8NH59 317 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SLC2A12Q8TD20 617 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ZFPM2Q8WW38 1151 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 DNAJA3Q96EY1 480 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ELMOD3Q96FG2 381 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 BMFQ96LC9 184 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ATF6BQ99941 703 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 TPSD1Q9BZJ3 242 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 OR10A5Q9H207 317 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SYT4Q9H2B2 425 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 POU2F3Q9UKI9 436 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ZNF281Q9Y2X9 895 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CPED1A4D0V7 1026 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 RBMXL2O75526 392 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 FARS2O95363 451 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 CSN2P05814 226 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 H2BFMP0C1H6 154 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 UBBP0CG47 229 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 UBCP0CG48 685 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 EN2P19622 333 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 RAB3AP20336 220 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ITGB8P26012 769 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CRYBB2P43320 205 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 TGM4P49221 684 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 RPS27AP62979 156 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 UBA52P62987 128 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 BTN1A1Q13410 526 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 IRF3Q14653 427 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 POU4F3Q15319 338 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 MLF2Q15773 248 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 SSX1Q16384 188 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ZNF529Q6P280 563 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 IDO2Q6ZQW0 420 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 USP53Q70EK8 1073 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 KCTD9Q7L273 389 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PNLDC1Q8NA58 520 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms