RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TIMP3P35625 211 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ACTR3P61158 418 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 DGCR6Q14129 220 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GTF2IRD2BQ6EKJ0 949 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR2T5Q6IEZ7 315 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SEM1Q6ZVN7 128 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GTF2IRD2Q86UP8 949 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MCEMP1Q8IX19 187 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR2T29Q8NH02 315 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RND1Q92730 232 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CFAP46Q8IYW2 2715 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 DOCK7Q96N67 2140 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 POLEQ07864 2286 aa12.95□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZNF462Q96JM2 2506 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RP1L1Q8IWN7 2480 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TRBV4-1A0A0J9YWV2 114 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ENO4A6NNW6 628 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ANKRD65E5RJM6 399 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SMAD9O15198 467 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PIP5K1CO60331 668 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 KRT36O76013 467 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TOXO94900 526 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CH25HO95992 272 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MT-ATP6P00846 226 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 IFI30P13284 250 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OTUD3Q5T2D3 398 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR2A2Q6IF42 318 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PAQR6Q6TCH4 344 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MED12LQ86YW9 2145 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 NRMQ8IXM6 262 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GCNT2Q8N0V5 402 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 OR6S1Q8NH40 331 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SLC7A13Q8TCU3 470 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ABHD3Q8WU67 409 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SLCO4A1Q96BD0 722 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 INTS12Q96CB8 462 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CCDC120Q96HB5 630 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 DHRS1Q96LJ7 313 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MOGAT1Q96PD6 335 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ALPK1Q96QP1 1244 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ASPNQ9BXN1 380 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 REEP1Q9H902 201 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RNF122Q9H9V4 155 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MEPEQ9NQ76 525 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 C20orf141Q9NUB4 165 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TMCC3Q9ULS5 477 aa12.94□□□□□ -0.34
TNFRSF1A-216ENST00000543995 A0A087WUU8 490 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 A0A0G2JNJ9 132 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 HSPB2A8KAH6 182 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 FTCDNL1E5RQL4 147 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 LRRN3E7EW58 273 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TNFRSF11BO00300 401 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TIPRLO75663 272 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RCBTB2O95199 551 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 BGLAPP02818 100 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TMIGD3P0DMS9 266 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 KLK2P20151 261 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 GRPRP30550 384 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 AGFG1P52594 562 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RASGEF1BQ0VAM2 473 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RNPS1Q15287 305 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 HSPB2Q16082 182 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ZNF74Q16587 644 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RIPPLY2Q5TAB7 128 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TMEM225Q6GV28 225 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TBPL2Q6SJ96 375 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MBOAT2Q6ZWT7 520 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 MAMDC2Q7Z304 686 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CCDC103Q8IW40 242 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RNF113BQ8IZP6 322 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SLC43A2Q8N370 569 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 TMEM99Q8N816 258 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PAPD5Q8NDF8 572 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PIGXQ8TBF5 258 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 RNF128Q8TEB7 428 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SGTBQ96EQ0 304 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 DENND2DQ9H6A0 471 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 KRCC1Q9NPI7 259 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 NANSQ9NR45 359 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 COQ3Q9NZJ6 369 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 KLHL13Q9P2N7 655 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 Q9UFV3 132 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 ERRFI1Q9UJM3 462 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SAMHD1Q9Y3Z3 626 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 AP4S1Q9Y587 144 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 U3KQV3 271 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 AQP7P3A6NL99 342 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 M0R082 166 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 CYTIPO60759 359 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 AGFG2O95081 481 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 HIST1H2ABP04908 130 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 SMSP52788 366 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 LSM11P83369 360 aaKnown RBP eCLIP12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 H3F3AP84243 136 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 IL1RL1Q01638 556 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 LTBQ06643 244 aa12.93□□□□□ -0.34
TNFRSF1A-216ENST00000543995 PPP1R8Q12972 351 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms