RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PYURFQ96I23 114 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 C7orf34Q96L11 122 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 ZNF300Q96RE9 604 aaPredicted RBP13.45□□□□□ -0.26
CD9-210ENST00000543916 ZNF426Q9BUY5 554 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 MUC13Q9H3R2 512 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 GLRX2Q9NS18 164 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 KLHL13Q9P2N7 655 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 RHCGQ9UBD6 479 aa13.45□□□□□ -0.26
CD9-210ENST00000543916 INTS1Q8N201 2190 aaKnown RBP13.45□□□□□ -0.26
CD9-210ENST00000543916 TCRBV5S2A0A599 114 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 ZNF716A6NP11 495 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 EEF1E1-BLOC1S5C9J1V9 151 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 PRSS44E7EML9 344 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 C19orf84I3L1E1 186 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 hCG_2039718K7EN88 272 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 ACOT8O14734 319 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 EEF1E1O43324 174 aaKnown RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 EIF1BO60739 113 aaKnown RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 FZD7O75084 574 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 PRSS23O95084 383 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 CGAP01215 116 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 BGLAPP02818 100 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 CBLP22681 906 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 P2RY4P51582 365 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 CTBP2P56545 445 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 LTBQ06643 244 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 FOXD4Q12950 439 aaPredicted RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 OTUD3Q5T2D3 398 aaPredicted RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 FAM69AQ5T7M9 428 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 GTF2IRD2BQ6EKJ0 949 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 TTC33Q6PID6 262 aaPredicted RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 PAQR6Q6TCH4 344 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 GTF2IRD2Q86UP8 949 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 DHFR2Q86XF0 187 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 TUSC5Q8IXB3 177 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 TMEM255BQ8WV15 326 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 SLC25A36Q96CQ1 311 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 MPP4Q96JB8 637 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 NAA11Q9BSU3 229 aaPredicted RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 TAPBPLQ9BX59 468 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 CADM1Q9BY67 442 aaKnown RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 BCO1Q9HAY6 547 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 KCNJ16Q9NPI9 418 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 MAN2C1Q9NTJ4 1040 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 NDUFAF4Q9P032 175 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 JKAMPQ9P055 326 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 KLHL9Q9P2J3 617 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 SEC14L4Q9UDX3 406 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 PLEKHB1Q9UF11 243 aaPredicted RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 EMC9Q9Y3B6 208 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 KLF2Q9Y5W3 355 aaPredicted RBP13.44□□□□□ -0.26
CD9-210ENST00000543916 ENPP4Q9Y6X5 453 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 CACNA1CQ13936 2221 aa13.44□□□□□ -0.26
CD9-210ENST00000543916 USP9YO00507 2555 aaPredicted RBP13.43□□□□□ -0.26
CD9-210ENST00000543916 AQP7P3A6NL99 342 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 LRRN3E7EW58 273 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 KPNA4O00629 521 aaPredicted RBP13.43□□□□□ -0.26
CD9-210ENST00000543916 GSC2O15499 205 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 SMNDC1O75940 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
CD9-210ENST00000543916 ATP5HO75947 161 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 THRBP10828 461 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 ASCL1P50553 236 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 UGT2B15P54855 530 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 IQCCQ4KMZ1 466 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 MTX3Q5HYI7 312 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 EEF1A1P5Q5VTE0 462 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 NUFIP2Q7Z417 695 aaKnown RBP13.43□□□□□ -0.26
CD9-210ENST00000543916 LUZP2Q86TE4 346 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 OFCC1Q8IZS5 231 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 OR6K3Q8NGY3 331 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 PIGXQ8TBF5 258 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 ZNF775Q96BV0 537 aaPredicted RBP13.43□□□□□ -0.26
CD9-210ENST00000543916 MOGAT1Q96PD6 335 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 EPYCQ99645 322 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 OPN3Q9H1Y3 402 aaPredicted RBP13.43□□□□□ -0.26
CD9-210ENST00000543916 PIGMQ9H3S5 423 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 GP6Q9HCN6 339 aa13.43□□□□□ -0.26
CD9-210ENST00000543916 MEPEQ9NQ76 525 aaPredicted RBP13.43□□□□□ -0.26
CD9-210ENST00000543916 NPDC1Q9NQX5 325 aaPredicted RBP13.43□□□□□ -0.26
CD9-210ENST00000543916 DOPEY2Q9Y3R5 2298 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 IGKV3D-15A0A087WSY6 115 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 M0R082 166 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 OR2T1O43869 369 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 DIRAS1O95057 198 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 YES1P07947 543 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 COL8A1P27658 744 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 GRPRP30550 384 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 RBM34P42696 430 aaKnown RBP13.42□□□□□ -0.26
CD9-210ENST00000543916 RASSF2P50749 326 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 SLC16A1P53985 500 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 ST3GAL3Q11203 375 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 SLC17A1Q14916 467 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 PDK3Q15120 406 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 TMEM201Q5SNT2 666 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 OR6S1Q8NH40 331 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 PFN4Q8NHR9 129 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 ZNF417Q8TAU3 575 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 TMEM239Q8WW34 195 aa13.42□□□□□ -0.26
CD9-210ENST00000543916 ZNF587Q96SQ5 575 aaPredicted RBP13.42□□□□□ -0.26
CD9-210ENST00000543916 FNDC11Q9BVV2 318 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms