RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 WBP2NLQ6ICG8 309 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 NUP54Q7Z3B4 507 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 LSRQ86X29 649 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 LIX1LQ8IVB5 337 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SAMD12Q8N8I0 201 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 ZNF527Q8NB42 609 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 ZSCAN1Q8NBB4 408 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 NPEPL1Q8NDH3 523 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 OR4M2Q8NGB6 313 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 OR4M1Q8NGD0 313 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 OR4C3Q8NH37 302 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 TRMT10AQ8TBZ6 339 aaKnown RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 RFT1Q96AA3 541 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 UPRTQ96BW1 309 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 ZMYND19Q96E35 227 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 RAB33BQ9H082 229 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SLC2A4RGQ9NR83 387 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 LRIT1Q9P2V4 623 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 NUFIP1Q9UHK0 495 aaKnown RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SLC6A5Q9Y345 797 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 RBMX2Q9Y388 322 aaKnown RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 MMACHCQ9Y4U1 282 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 NUP210LQ5VU65 1888 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 COL5A1P20908 1838 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 IGHV1OR15-9A0A0B4J2B8 117 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 NDUFB5O43674 189 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 HYAL3O43820 417 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 IL33O95760 270 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SPI1P17947 270 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 MAOAP21397 527 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 S100A1P23297 94 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 RPL4P36578 427 aaKnown RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 ACVR1BP36896 505 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 PGDP52209 483 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 OR10A3P58181 314 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 BTG1P62324 171 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SIRPAP78324 504 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 MRPS15P82914 257 aaKnown RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SRSF5Q13243 272 aaKnown RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 MADCAM1Q13477 382 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 NDUFAF6Q330K2 333 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 TP53I3Q53FA7 332 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 BAIAP2L2Q6UXY1 529 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 RPTNQ6XPR3 784 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 OVCH1Q7RTY7 1134 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 ATG4DQ86TL0 474 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 NOXA1Q86UR1 476 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 RFLNBQ8N5W9 214 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 Q8N9G6 341 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 C7orf57Q8NEG2 295 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 OR51Q1Q8NH59 317 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 MMABQ96EY8 250 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 CMTM3Q96MX0 182 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SLC38A3Q99624 504 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 WACQ9BTA9 647 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 C12orf10Q9HB07 376 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 PDE7BQ9NP56 450 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 UBQLN4Q9NRR5 601 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 RABL2AQ9UBK7 228 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 HIF3AQ9Y2N7 669 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 ALG5Q9Y673 324 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SLCO1B1Q9Y6L6 691 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 A0A1W2PR77 199 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 A0A1W2PRG6 482 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 FAM47E-STBD1D6RA91 191 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 J3KRW8 73 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 IMPA2O14732 288 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 GLCEO94923 617 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 CD27P26842 260 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 SLC6A1P30531 599 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 LCN1P31025 176 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 PPICP45877 212 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 SLC25A1P53007 311 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 RPS11P62280 158 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPRO-208ENST00000542557 SKP2Q13309 424 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 GRM7Q14831 915 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 NNATQ16517 81 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 ZNF57Q68EA5 555 aaPredicted RBP5.98□□□□□ -1.45
PTPRO-208ENST00000542557 BICRALQ6AI39 1079 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 UNQ9370/PRO34162Q6UXP9 181 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 UBE2J2Q8N2K1 259 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 LRRC17Q8N6Y2 441 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 HAVCR2Q8TDQ0 301 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 UBASH3BQ8TF42 649 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 THAP4Q8WY91 577 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 SLC46A1Q96NT5 459 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 THAP7Q9BT49 309 aaPredicted RBP5.98□□□□□ -1.45
PTPRO-208ENST00000542557 RANGRFQ9HD47 186 aaPredicted RBP5.98□□□□□ -1.45
PTPRO-208ENST00000542557 RPRD1BQ9NQG5 326 aaKnown RBP5.98□□□□□ -1.45
PTPRO-208ENST00000542557 LANCL2Q9NS86 450 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 NCDNQ9UBB6 729 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 NLKQ9UBE8 527 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 GMEB2Q9UKD1 530 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 ADAM18Q9Y3Q7 739 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 SPTBN5Q9NRC6 3674 aaKnown RBP5.98□□□□□ -1.45
PTPRO-208ENST00000542557 ELOA3DA6NLF2 546 aaPredicted RBP5.98□□□□□ -1.45
PTPRO-208ENST00000542557 A8MV72 311 aaPredicted RBP5.98□□□□□ -1.45
PTPRO-208ENST00000542557 C17orf105B2RV13 164 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 FLRT2O43155 660 aa5.98□□□□□ -1.45
PTPRO-208ENST00000542557 UBL3O95164 117 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms