RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 NOSIPQ9Y314 301 aaKnown RBP13.67□□□□□ -0.22
ECHDC2-223ENST00000542552 FLVCR1Q9Y5Y0 555 aa13.67□□□□□ -0.22
ECHDC2-223ENST00000542552 ITPR3Q14573 2671 aa13.67□□□□□ -0.22
ECHDC2-223ENST00000542552 ZNF469Q96JG9 3925 aaPredicted RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 IGKV1D-42A0A075B6H8 117 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 A0A0B4J2E0 115 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 A0A1B0GX12 115 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 ELOA3DA6NLF2 546 aaPredicted RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 FMO6PO60774 539 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 OPN1SWP03999 348 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 COX5AP20674 150 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 DRD4P21917 467 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 LSP1P33241 339 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 VEZF1Q14119 521 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 OR1Q1Q15612 314 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 TSC22D1Q15714 1073 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 NPTX1Q15818 432 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 ELOA3BQ3SY89 546 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 ALG10BQ5I7T1 473 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 FBXW10Q5XX13 1052 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 TREML1Q86YW5 311 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 ZNF100Q8IYN0 542 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 POU5F2Q8N7G0 328 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 ELOA3Q8NG57 546 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 KISS1RQ969F8 398 aaPredicted RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 S100PBPQ96BU1 408 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 RCN3Q96D15 328 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 KTI12Q96EK9 354 aaPredicted RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 SLC47A1Q96FL8 570 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 ZC3HAV1LQ96H79 300 aaKnown RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 ELAC2Q9BQ52 826 aaKnown RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 USB1Q9BQ65 265 aaKnown RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 SF3B5Q9BWJ5 86 aaKnown RBP13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 MYLK2Q9H1R3 596 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 USP22Q9UPT9 525 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 SLC9A8Q9Y2E8 581 aa13.66□□□□□ -0.22
ECHDC2-223ENST00000542552 A0A087WUJ7 227 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 M0R3H8 397 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 MRPL33O75394 65 aaKnown RBP13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 VAMP5O95183 116 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 AHSA1O95433 338 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 COX4I1P13073 169 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 IGHV1-2P23083 117 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 IST1P53990 364 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 FBXW9Q5XUX1 488 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 C8orf82Q6P1X6 216 aaPredicted RBP13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 ERICH5Q6P6B1 374 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 C5orf46Q6UWT4 87 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 PAMR1Q6UXH9 720 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 LINC00114Q6XXX2 140 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 RANBP3LQ86VV4 465 aaPredicted RBP13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 OR9K2Q8NGE7 335 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 OR4D11Q8NGI4 311 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 OR6T1Q8NGN1 323 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 TAAR8Q969N4 342 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 TMEM45BQ96B21 275 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 APH1AQ96BI3 265 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 PIK3IP1Q96FE7 263 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 TAPBPLQ9BX59 468 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 TMEM27Q9HBJ8 222 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 PARPBPQ9NWS1 579 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 ADPRHL2Q9NX46 363 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
ECHDC2-223ENST00000542552 GMNCA6NCL1 334 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 PDLIM1O00151 329 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 OR2T1O43869 369 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 SNX3O60493 162 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 IL32P24001 234 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 RPS5P46782 204 aaKnown RBP13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 GYS2P54840 703 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 CDH12P55289 794 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 NCALDP61601 193 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 TAB1Q15750 504 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 BEX5Q5H9J7 111 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 ZNF613Q6PF04 617 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 SEZ6L2Q6UXD5 910 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 BHLHA15Q7RTS1 189 aaPredicted RBP13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 RBM45Q8IUH3 476 aaKnown RBP13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 ZNF433Q8N7K0 673 aaPredicted RBP13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 OR6S1Q8NH40 331 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 RASSF5Q8WWW0 418 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 HSD17B8Q92506 261 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 MBD6Q96DN6 1003 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 MCHR1Q99705 422 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 PCDHAC1Q9H158 963 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 CMTM6Q9NX76 183 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 ITGB1BP2Q9UKP3 347 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 EDARQ9UNE0 448 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 TEP1Q99973 2627 aaKnown RBP13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 ROS1P08922 2347 aa13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 RAI1Q7Z5J4 1906 aaPredicted RBP13.64□□□□□ -0.23
ECHDC2-223ENST00000542552 TRAV36DV7A0A075B6V5 113 aa13.63□□□□□ -0.23
ECHDC2-223ENST00000542552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.63□□□□□ -0.23
ECHDC2-223ENST00000542552 CCT8L1PA6NM43 557 aa13.63□□□□□ -0.23
ECHDC2-223ENST00000542552 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
ECHDC2-223ENST00000542552 LYZL6O75951 148 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms