RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
CNOT9-208ENST00000542068 ZNRF4Q8WWF5 429 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 CXorf58Q96LI9 332 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 TIMM29Q9BSF4 260 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 SCP2D1Q9UJQ7 156 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 ARPC5O15511 151 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 PEX14O75381 377 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 TSPAN9O75954 239 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 SULT1A3P0DMM9 295 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 SULT1A4P0DMN0 295 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 HIST1H1CP16403 213 aaKnown RBP14.1□□□□□ -0.15
CNOT9-208ENST00000542068 GBX2P52951 348 aaPredicted RBP14.1□□□□□ -0.15
CNOT9-208ENST00000542068 NRG3P56975 720 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 PSMA6P60900 246 aaKnown RBP14.1□□□□□ -0.15
CNOT9-208ENST00000542068 PITPNAQ00169 270 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 ILF3Q12906 894 aaKnown RBP eCLIP14.1□□□□□ -0.15
CNOT9-208ENST00000542068 ZIC1Q15915 447 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 STPG1Q5TH74 334 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 OR56B4Q8NH76 319 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 LINC00052Q96N35 136 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 TSPAN10Q9H1Z9 355 aaPredicted RBP14.1□□□□□ -0.15
CNOT9-208ENST00000542068 HRASLSQ9HDD0 168 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 SIGLEC7Q9Y286 467 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 SLC35A3Q9Y2D2 325 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 FXYD6-FXYD2A0A087WZ82 144 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 B4DGG1 531 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 CTSEP14091 401 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 RPS27P42677 84 aaKnown RBP14.1□□□□□ -0.15
CNOT9-208ENST00000542068 KCNAB1Q14722 419 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 AMZ1Q400G9 498 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 FBXO42Q6P3S6 717 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 BRIX1Q8TDN6 353 aaKnown RBP14.1□□□□□ -0.15
CNOT9-208ENST00000542068 RLN3Q8WXF3 142 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 MOAP1Q96BY2 351 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 NMNAT3Q96T66 252 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 FXYD6Q9H0Q3 95 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 NUP50Q9UKX7 468 aa14.1□□□□□ -0.15
CNOT9-208ENST00000542068 PCP4L1A6NKN8 68 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 RDH16O75452 317 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 CCR9P51686 369 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 RPS15P62841 145 aaKnown RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 DLX2Q07687 328 aaPredicted RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 MELKQ14680 651 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 RNF44Q7L0R7 432 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 TPRA1Q86W33 373 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 OR11G2Q8NGC1 345 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 RBPMSQ93062 196 aaKnown RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 GSX2Q9BZM3 304 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 TMEM27Q9HBJ8 222 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 KCMF1Q9P0J7 381 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 FKBP7Q9Y680 259 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 SPACA6W5XKT8 324 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 UNC13CQ8NB66 2214 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 A0A1B0GTH9 108 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 TCRBV16S1A1N1A0A5B0 115 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 H0YGG7 62 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 K7EQS6 105 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 IFNA16P05015 189 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 CELA2BP08218 269 aaPredicted RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 UGT2B7P16662 529 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 NAT1P18440 290 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 ADH7P40394 386 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 ARHGDIBP52566 201 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 ARF3P61204 181 aaPredicted RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 PRSS58Q8IYP2 241 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 FAM3CQ92520 227 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 HSPA12BQ96MM6 686 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 TSSK2Q96PF2 358 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 NOX3Q9HBY0 568 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 FGF17O60258 216 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 RAD1O60671 282 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 MMP15P51511 669 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 EEF1A1P68104 462 aaKnown RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 KLF9Q13886 244 aaPredicted RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 YOD1Q5VVQ6 348 aaPredicted RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 DMKNQ6E0U4 476 aaPredicted RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 ARMC6Q6NXE6 501 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 MFSD9Q8NBP5 474 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 ZPLD1Q8TCW7 415 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 WDR92Q96MX6 357 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 ANKRD19PQ9H560 264 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 ZNF223Q9UK11 482 aaPredicted RBP14.09□□□□□ -0.15
CNOT9-208ENST00000542068 COPS3Q9UNS2 423 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 SLC17A4Q9Y2C5 497 aa14.09□□□□□ -0.15
CNOT9-208ENST00000542068 TRIOBPQ9H2D6 2365 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 EPOPA6NHQ4 379 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 ADAM11O75078 769 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 CTSBP07858 339 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 FBXO45P0C2W1 286 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 ACSM4P0C7M7 580 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 PSMB1P20618 241 aaKnown RBP14.08□□□□□ -0.16
CNOT9-208ENST00000542068 SIRPAP78324 504 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 MAT1AQ00266 395 aaKnown RBP14.08□□□□□ -0.16
CNOT9-208ENST00000542068 OOSP2Q86WS3 158 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 OR9A4Q8NGU2 314 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 OR1F2PQ96R84 312 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 ACTR10Q9NZ32 417 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 ST6GALNAC2Q9UJ37 374 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 NGFRP08138 427 aa14.08□□□□□ -0.16
CNOT9-208ENST00000542068 TMIGD3P0DMS9 266 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms