RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PILRAQ9UKJ1 303 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ABCG2Q9UNQ0 655 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 ERVW-1Q9UQF0 538 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 NDUFAF1Q9Y375 327 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 RBMX2Q9Y388 322 aaKnown RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 SLC22A7Q9Y694 548 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 MAGI2Q86UL8 1455 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 CDK12Q9NYV4 1490 aaPredicted RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 MYH15Q9Y2K3 1946 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PPRC1Q5VV67 1664 aaKnown RBP2.75□□□□□ -1.97
USP28-210ENST00000542033 SNED1Q8TER0 1413 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PTPRUQ92729 1446 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 PSME4Q14997 1843 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 TAF1LQ8IZX4 1826 aa2.75□□□□□ -1.97
USP28-210ENST00000542033 EIF4G3O43432 1585 aaKnown RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 CEP170Q5SW79 1584 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 HECW2Q9P2P5 1572 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 MYH14Q7Z406 1995 aaKnown RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 ARHGEF11O15085 1522 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 KIAA1210Q9ULL0 1709 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 A0A1B0GU03 582 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TUBAL3A6NHL2 446 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 RFPL4AA6NLU0 287 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CENPXA8MT69 81 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 C12orf71A8MTZ7 269 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 RFPL4AL1F8VTS6 287 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CDC7O00311 574 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ZBTB5O15062 677 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CHADO15335 359 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 NUPL2O15504 423 aaKnown RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 CALUO43852 315 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 GMFGO60234 142 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 SNAP91O60641 907 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 HUS1O60921 280 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 VPS26AO75436 327 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 PSMG1O95456 288 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TXNDC12O95881 172 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 LGI1O95970 557 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 PCCBP05166 539 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 FCER2P06734 321 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CRHP06850 196 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 SERPINA6P08185 405 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 HOXD4P09016 255 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 RRASP10301 218 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CD36P16671 472 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TNNI3P19429 210 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 NT5EP21589 574 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 AADACP22760 399 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CYP2F1P24903 491 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 PTPN4P29074 926 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CAPGP40121 348 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 MAGEA6P43360 314 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CDKN1BP46527 198 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 SLC6A8P48029 635 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CSNK1DP48730 415 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 NDST2P52849 883 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 XGP55808 180 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 OR1D5P58170 312 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CDKL1Q00532 357 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 DEFA6Q01524 100 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 MYL5Q02045 173 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 MFGE8Q08431 387 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 CNTN1Q12860 1018 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TSPAN31Q12999 210 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 APOFQ13790 326 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ZNF846Q147U1 533 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TRAM2Q15035 370 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 NECTIN1Q15223 517 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 OR1C1Q15619 314 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TOMM34Q15785 309 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 MTHFSDQ2M296 383 aaKnown RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 HSDL1Q3SXM5 330 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 RNF212Q495C1 297 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 LRRC37A5PQ49AS3 106 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 NADK2Q4G0N4 442 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 PAGE2BQ5JRK9 111 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 PPM1LQ5SGD2 360 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 C10orf120Q5SQS8 335 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 OR4C11Q6IEV9 310 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 PMF1Q6P1K2 205 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 C1orf94Q6P1W5 598 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 CCDC137Q6PK04 289 aaKnown RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 UGT2A3Q6UWM9 527 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 METTL7BQ6UX53 244 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 PLEKHG7Q6ZR37 379 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 Q6ZRP5 223 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 P4HA3Q7Z4N8 544 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 C5orf24Q7Z6I8 188 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 DPPA2Q7Z7J5 298 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ADGRD2Q7Z7M1 963 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 YRDCQ86U90 279 aaKnown RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 KRTAP7-1Q8IUC3 87 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 ZC3H3Q8IXZ2 948 aaKnown RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 CENPLQ8N0S6 344 aaPredicted RBP2.74□□□□□ -1.97
USP28-210ENST00000542033 MFSD9Q8NBP5 474 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 TMEM35BQ8NCS4 154 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 C19orf18Q8NEA5 215 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 NUP37Q8NFH4 326 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 OR2L5Q8NG80 312 aa2.74□□□□□ -1.97
USP28-210ENST00000542033 OR52M1Q8NGK5 317 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms